Pseudomonas canadensis: V6L78_03915
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Entry
V6L78_03915 CDS
T10710
Symbol
tssA
Name
(GenBank) type VI secretion system protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6L78_03915 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcaa02044
]
V6L78_03915 (tssA)
Secretion system [BR:
pcaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6L78_03915 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Cys1
Motif
Other DBs
NCBI-ProteinID:
WWL85064
LinkDB
All DBs
Position
complement(886613..887632)
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AA seq
339 aa
AA seq
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MDVPLLLTAVSATSPCGEDMEYDAQFLQLERDAKGQPERSMGDSILPAEPPEWRSIQQQS
LDLLGRSKDLRITHFLLQSALALQGVAGLAEALTLIDALLRDYWADLHPRLDADDDNDPT
VRINALTGLTCDTNIRLLRESILTRSRTFGPVSLRAALNASGLLSFPDEQLGAQQLNAAF
LDSDPEHLQTTRNALIAARTACEAIERQVNDQVGSAQGVDLSALKQPLKQALQILNQAVP
GTDSSSEPEAVSDDNAPSADFAAAPAAPRPVGDIASRDDVLRSLDKILAYYTRHEPSSPL
PVLLNRAKNLVHADFAAIVRNLIPDGMSQFENLRGPDGE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtgccgttgctgctcaccgccgtttccgcgacttcgccctgtggcgaagacatg
gaatatgacgcgcaatttctgcaattggagcgtgatgccaagggccaacccgagcgcagc
atgggcgactccatcctgcccgctgaaccgccggaatggcgcagcatccagcagcaaagc
ctcgacttgctcgggcgcagcaaagacctgcgcatcacccatttcctgctgcaaagcgcc
ctcgccctccagggtgtggcgggccttgcagaagcactgacgctgatcgacgcgttgctg
cgcgattactgggccgacctgcacccgcgcctggatgccgacgatgacaacgaccccacc
gtgcgcatcaacgccctcaccggcctgacctgcgacaccaatattcgcttgctgcgcgaa
agcatcctcacacgctcgcgcactttcgggcccgtgagcctgcgcgcggcgctcaacgcc
agtggcctgttgagcttccccgacgagcaactcggcgcccagcagctcaacgccgcgttc
ctcgacagcgaccccgagcacttgcaaaccacccgtaacgcgctgattgcggcgcgtacg
gcgtgcgaagccatcgaacggcaggtcaacgatcaggtcggttccgcccaaggggtggac
ctcagtgccttgaagcaaccgctcaaacaagcgttgcagatcctcaatcaagcggtgccc
ggcaccgacagcagcagcgaacccgaggccgtcagtgacgacaatgccccctcggccgac
ttcgccgctgcgcccgcagcaccgcgcccggttggcgacatcgccagccgcgacgatgtg
ctgcgcagcctcgacaagatccttgcgtactacacccggcacgagccttcgagcccgctg
ccggtgctgttgaaccgggccaagaatctggtgcacgccgacttcgcggccatcgtgcgc
aatctgattcccgacggcatgtcccaatttgaaaacctgcgcggcccggacggcgaataa
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