KEGG   Pseudomonas canadensis: V6L78_04295
Entry
V6L78_04295       CDS       T10710                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pcaa  Pseudomonas canadensis
Pathway
pcaa00300  Lysine biosynthesis
pcaa00470  D-Amino acid metabolism
pcaa01100  Metabolic pathways
pcaa01110  Biosynthesis of secondary metabolites
pcaa01120  Microbial metabolism in diverse environments
pcaa01230  Biosynthesis of amino acids
Module
pcaa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcaa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    V6L78_04295 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V6L78_04295 (dapF)
Enzymes [BR:pcaa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     V6L78_04295 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: WWL85136
LinkDB
Position
complement(968175..969005)
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRSDGQISVNM
GAPRLVPADIPFQATEQAVSYALDVDGKTVDIAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVLMTGPASRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacgggctgggcaatgatttcatggtcctcgacctg
gtcagccagcacgcgcatatcctgcccaagcacgctaaacagtggggcgaccgtcacacc
ggcattggtttcgaccaattgctgatcgtcgaagcgccgagcaacccggaggtggatttc
cgttaccggatcttcaactccgacggttccgaagtggaacagtgcggcaacggtgcgcgc
tgcttcgcacgctttgtgctggacaagcgcctgaccgccaagcggcagatccgcgtcgag
accaagagtggcgtgatcgagttggatatccgcagtgatggccagatcagtgtcaacatg
ggcgcgccgcgcctggtgccggcggacatcccgttccaggctaccgagcaagctgtcagc
tacgcgctggacgttgatggcaagaccgtcgacatcgccgccgtgtccatgggtaaccct
catgcggtgctgcgggtgaacgacatcaataacgcccccgtgcatgaattggggccgaaa
atcgaacaccacccgcgctttccggcgcgggtcaacgtgggtttcctgcaggtgatcgac
cgtaaccgcgcgcaattgcgtgtatgggaacgcggcgccggcgaaacccaggcctgcggc
accggtgcttgcgccgctgccgtggccgcgatcagccaggggtggatggattcgccgctg
ctgatcgacctgcccggtggacgcttgtccatcgagtgggcaggccctggccatccggtg
ctgatgaccgggccggcctcgcgcgtatacgaaggacaggtccgtctatga

DBGET integrated database retrieval system