KEGG   Pseudomonas canadensis: V6L78_04300
Entry
V6L78_04300       CDS       T10710                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pcaa  Pseudomonas canadensis
Pathway
pcaa00300  Lysine biosynthesis
pcaa00470  D-Amino acid metabolism
pcaa01100  Metabolic pathways
pcaa01110  Biosynthesis of secondary metabolites
pcaa01120  Microbial metabolism in diverse environments
pcaa01230  Biosynthesis of amino acids
Module
pcaa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcaa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    V6L78_04300 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V6L78_04300 (lysA)
Enzymes [BR:pcaa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     V6L78_04300 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WWL85137
LinkDB
Position
complement(969009..970256)
AA seq 415 aa
MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTRDDMRRALEVGVH
CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRASEARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgcccagcgctttggcaccccgacctatgtgtattcccgtgcgcatatcgaagcccag
taccgctcgttcaccgatgccctcgacggtgtaccgcacctggtgtgctacgcggtcaag
gccaactccaacctcggcgtactgaatgtcctggcgcgcctcggcgctggtttcgacatc
gtgtcgcgtggcgagctggaacgtgtactggccgctggcggcaaggctgacaagatcgtg
ttctccggcgtcggcaagacccgcgatgacatgcgccgcgccctggaagtcggcgtgcat
tgcttcaacatcgaatccaccgacgagctggaacgcctgcaggttgtggccgccgaaatg
ggcgttcgcgcgccgatctccctgcgcgtcaacccggacgtcgatgccggcacccaccca
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaggac
gtatacatccgcgccgcgcaactgccgaacctggaagtgctgggtgtcgactgccatatc
ggctcgcaactgaccacgctgccgccgttcctggatgcgctcgatcgcctgctggcgttg
atcgaccgtctcggtgaatgcggcatctacctgcaccacatcgacctcggtggtggcgtg
ggcgtgcgttatcgcgacgaagagccgccgctgattgccgactatatccaggcggtgcgc
gagcgcatcgaaggccgtgacctgacgctgatgttcgagcctggccgctatatcgtcgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgccgcgcgccagcgaagcccgcgcctacgacatcgtcggcccg
atctgcgagaccggtgacttcctggccaaggaccgtcaactggccctggaagaaggcgat
ctgctggccgtgcattcggccggtgcctatgggtttgtcatgagttccaactacaacacc
cgcggccgtaccgccgaggtgttggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa

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