Pseudomonas canadensis: V6L78_05720
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Entry
V6L78_05720 CDS
T10710
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00260
Glycine, serine and threonine metabolism
pcaa01100
Metabolic pathways
Module
pcaa_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L78_05720 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
OPT
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WWL85406
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Position
1259510..1261453
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AA seq
647 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVNMWRRGRASKVDLLGGLLAMPKRYMVDLHHVVARD
KYIANTHVATALGFVLSALLAILVHGFGLQSRILGYALLLATVLMFVGATFVYLRRRNPP
SRLSKGPWMRLPKSLMAFSVSFFLVTLPVTGILPADFGGWLLAALLSVGVLWGVSEMFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLSDKTAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPIGEHSG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRLNWAADLNLPLLSEKGSADVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKVDFAVLGLEERDSGDVARRLGDEATFQLLASRNIQTLAKYSFKRIVTCDPHSFH
VLKNEYGAFNGNYLVQHHSTFMAELIGEGALNLGQHKGNSVTYHDPCYLGRYNGEYEAPR
QVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETGAELVAVGC
PQCTAMLEGVVEPRPLIKDIAELVADALLEDAAPTKAPIKREPAEVH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaccttgctgcctattctcttgtttgccgccctgggccttgctgtcctcggc
gccctgcgccgggtgaacatgtggcgccgtggccgcgcgtccaaggtcgacctgctgggc
ggcctgttggccatgcccaagcgctacatggtcgacctgcaccacgtggtcgcccgcgac
aaatacatcgccaacacccacgtcgctaccgcgctgggctttgtgctgtcggcgttgctc
gccattctggtccatggcttcggcctgcagagccgtatccttggctatgccttactgctg
gcgacggtgctgatgtttgtcggcgccacctttgtgtacctgcgtcgccgtaatccgcct
tcacgtctgtcaaagggcccatggatgcgcctgccgaaaagccttatggcgttctcggtc
agcttcttcctggtcaccctgccggtgactggcatcctgccagcggacttcggcggctgg
ttgcttgcagcgttgctcagcgtgggcgtgctgtggggcgtgtccgagatgttcttcggc
atgacctggggcggcccgatgaaacacgccttcgccggtgccttgcacctggcctggcat
cgccgcgccgagcgctttggcggcggccgctccaccgggttgaagccgctggacctcagc
gataaaaccgcgccgctgggcgtggagaagcccaaggatttcacctggaaccaactgctc
ggcttcgacgcctgcgtacagtgcggcaagtgcgaagccgcttgcccggccttcgccgcc
ggccagccgctgaacccgaaaaagctgatccaggacatggtggtcggcctggccggtggc
actgatgccaagttcgccggcagcccctatccaggcaaaccgatcggcgaacacagcggc
aacccgcatcagcccatcgtcaacggcctggtggacgccgagaccctgtggtcctgcacc
acctgccgcgcctgcgtcgaagagtgcccgatgatgatcgagcacgtggacgccatcgtc
gacatgcgccgccacctcaccctggaaaaaggcgccacgccgaacaagggcgctgaagtg
ctggaaaacctgatcgccaccgacaacccgggcggtttcgcaccaggtggtcgcctgaac
tgggcggcagacctgaacctgccgctgctcagcgaaaagggcagcgccgacgtgctgttc
tgggtcggcgacggtgcctttgacatgcgtaaccaacgcaccctgcgtgccttcgtcaaa
gtgctcaaagccgccaaggtcgactttgccgtgctcggcctggaagagcgtgacagcggc
gatgtggcccgtcgtctgggcgatgaagcgaccttccagttgctggcttcgcgcaatatc
cagactctggccaaatacagcttcaagcgcatcgtcacctgcgatccgcacagcttccat
gtgctgaaaaacgaatacggcgccttcaatggcaactacctggtgcagcatcacagcacc
ttcatggccgaactgatcggcgagggcgcgctgaacctcggccagcacaagggcaacagc
gtgacctatcacgacccgtgctacctggggcgctacaacggcgagtacgaggcgccgcgc
caagtgctgcgggcattgggcatcgaggtcaaggagatgcaacgctcgggcttccgttca
cgctgctgcggtggcggtggcggtgcgccgattaccgacattcccggcaagcaacggatt
ccggacatgcgcatggacgacatccgcgaaaccggcgccgagctggtggccgtgggttgt
ccacagtgcacggcgatgctggaaggcgtagtcgagccgcgcccgttgatcaaggatatt
gccgagctggtggccgacgcattacttgaagatgcagcgcccaccaaagctcccatcaag
cgtgaacctgcggaggtgcattaa
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