Pseudomonas canadensis: V6L78_05760
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Entry
V6L78_05760 CDS
T10710
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00260
Glycine, serine and threonine metabolism
pcaa00460
Cyanoamino acid metabolism
pcaa00630
Glyoxylate and dicarboxylate metabolism
pcaa00670
One carbon pool by folate
pcaa00680
Methane metabolism
pcaa01100
Metabolic pathways
pcaa01110
Biosynthesis of secondary metabolites
pcaa01120
Microbial metabolism in diverse environments
pcaa01200
Carbon metabolism
pcaa01230
Biosynthesis of amino acids
pcaa01240
Biosynthesis of cofactors
pcaa04981
Folate transport and metabolism
Module
pcaa_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V6L78_05760 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V6L78_05760 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L78_05760 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V6L78_05760 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V6L78_05760 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V6L78_05760 (glyA)
Enzymes [BR:
pcaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V6L78_05760 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WWL85414
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All DBs
Position
1269469..1270722
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAE
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVPQCIELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacaagaccagattcagggatatgacgacgcactgctggcggccatgaat
gccgaagagcagcgtcaggaagatcatatcgagctgatcgcgtcagagaactacaccagc
aaacgcgtgatggaagcccagggcagcggcctcaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggtggctgcgagcatgtggacaaggtcgaagccctggccatcgaa
cgcgccaagcaattgttcggcgccgattacgccaacgtgcagccgcactccggttcttcc
gccaacagcgcggtgtacctggccctgttgaacgccggtgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgcggtgcagtacggcatcaacaccgacaccggcctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaaaatggtcgtagccggtttctctgcctactccaag
actctggatttcccacgtttccgtcagatcgccgacaaggtgggcgcactgctgttcgtc
gacatggcccacgtcgccggcctggttgccgctggcctgtacccgaacccgctgccgtat
gccgacgtagtcaccaccactacccacaagaccctgcgcggtccacggggcggtctgatc
ctggccaagtccaacgaagaaatcgaaaagaaactcaacgctgcggtattcccaggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagcgctg
gagccgggcttcaaggcctatcagcaacaagtgatcgacaacgcccaggccatggccgag
gtgttcatcaagcgcggatatgacgtggtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctcaccggcaaagaggcggacgccgccctgggtcgcgcc
cacatcaccgtcaacaagaacgcggtgccgaatgacccgcagtcgccgttcgtgacctcg
ggcctgcgcatcggcactccggcggtgaccacgcgtggtttcaaagtgccgcagtgcatc
gaactggctggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga
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