Pseudomonas canadensis: V6L78_06875
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Entry
V6L78_06875 CDS
T10710
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_06875
Transporters [BR:
pcaa02000
]
Other transporters
Pores ion channels [TC:
1
]
V6L78_06875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
LprI
Motif
Other DBs
NCBI-ProteinID:
WWL85620
LinkDB
All DBs
Position
complement(1487521..1489413)
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AA seq
630 aa
AA seq
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MNRLHFALPFLLLPATDLLADTRDDALKLPDVVISANRQVQARNDSSAANTVFTRDDIDR
LQPSSVTDLLSRVPGVQIAQTGGRGSLPGVFIRGTKSAQSLVLVDGQRIANATSGDSGLQ
FLSVDQIERVEVLRGSRSVIYGSDAIGGVIQIFTRRNAQAGLHPRLHVGFGSNQTWERSL
GLSGGDERTRFNLGASLDETRGINWTHESFASDGDRDAYRNKSLSLNLSHSLNDDLEVGF
NLLDGRGKSEYDNPFGRYVSFFETVGQKPYTDYTVSSASSYVDAKLNERWQTRLELGHSE
NRDTKRDHLSAEGSAFNTYRDAVNWQNDLTLDERNSLILGGDWYEDRVHATTDFDADSRW
NRAAFIQHRFAAERFSTELGLRHDTNQQFGSQNTWSGTLTVPLNPDNEVLLSYSEGFRAP
SFNDLYYPGSSNPDLKPEHSKTYELQWRSQLSDTLRLETSLYRTDLKDAIVAQPVDFYIP
HNVASARINGFEAALKQQLFGWQGNLGVSIIDPRDRDSGHTLARRARRTLNLDLDRQFDK
LGLGASWQAISSSYDDEENRNRLGGYALLGLRSSWALNREVLLSVKVDNVLGKEYARAMY
SYQDPAFENNQHYREEGRVWMFGVTWTPEL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtctgcactttgccctgccctttcttcttctgcctgccaccgacctgctcgcc
gacacccgcgatgacgccttgaaactccccgacgtcgttatcagcgccaaccgccaggtc
caggcccgcaacgacagcagcgccgccaacaccgtcttcacccgcgacgatatcgaccgc
ctgcaacccagcagcgtgactgacctgctcagccgcgtgcctggcgtgcaaatcgcgcaa
accggtgggcgcggcagtttgccgggggtgttcattcgcggcaccaagtcggcccagagc
ctggtgctggtggacggccagcgcattgccaacgccacctcgggcgacagtggactgcag
tttctgagcgttgaccagattgaacgtgtggaagtgctgcgcggctcgcgctcagtgatc
tacggcagcgatgccatcggcggggttatccagattttcacccgacgcaatgcccaagcc
ggccttcatccgcgcctgcatgtgggttttggcagcaaccagacgtgggaacgcagcctc
ggcctgtcgggcggcgatgagcgcacgcgcttcaacctcggggccagcctggatgaaacc
cgaggcatcaattggactcatgaatcgtttgccagcgatggtgatcgtgacgcctatcgc
aacaagtccttgagcctgaacctcagccactcgctgaacgatgacctcgaagtcggcttc
aacctgctggatggtcggggcaagtcggaatatgacaacccgttcgggcgctacgtcagc
tttttcgaaaccgtcggccagaagccctacaccgactacacggtgagcagcgccagcagt
tatgtcgacgccaaactcaacgagcgctggcagacccgactggagctgggccacagcgag
aaccgcgacaccaagcgcgaccacctcagtgctgagggcagcgccttcaacacctatcgc
gacgcggtgaactggcagaacgatttgactctggatgagcgcaacagcctgatcctcggt
ggcgactggtacgaagatcgagtgcatgccaccaccgactttgacgcggacagccgctgg
aaccgcgcggcgtttatccagcatcgcttcgcggccgaacggttttccaccgagttgggc
ctgcgccacgacaccaaccagcagttcggcagccagaacacctggagtggcaccctgacc
gtgccgctgaaccctgacaatgaagtgttgctgtcttacagcgaaggcttccgcgcgccc
agcttcaacgacttgtactaccccggcagcagcaaccccgacctcaagcccgagcattca
aaaacctatgagctgcaatggcgcagtcaactgagtgacaccctgcgcctggaaacctcg
ctgtatcgcaccgacctgaaggacgccatcgtcgcgcagccggtggacttctacatccca
cacaacgtggcgtccgcacgcatcaatggctttgaagccgcgctcaagcaacaactgttc
ggctggcaaggcaatctaggcgtctcgatcatcgaccctcgtgaccgtgacagcggccat
accctggcccgccgggcgcggcgcactctgaacctggacttggatcgacagtttgacaag
cttgggctgggcgccagttggcaagccatcagcagcagctatgacgatgaagagaaccgc
aatcgcctcggcgggtatgccttgttggggctacgcagcagttgggcgctgaaccgcgag
gtgctgctgtcagtgaaggtcgataacgtgctgggcaaggagtatgcacgggcgatgtac
agctatcaggacccggccttcgaaaacaaccagcattaccgtgaagaaggacgggtgtgg
atgtttggggtcacttggacgcctgaactctga
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