Pseudomonas canadensis: V6L78_07610
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Entry
V6L78_07610 CDS
T10710
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00260
Glycine, serine and threonine metabolism
pcaa00460
Cyanoamino acid metabolism
pcaa00630
Glyoxylate and dicarboxylate metabolism
pcaa00670
One carbon pool by folate
pcaa00680
Methane metabolism
pcaa01100
Metabolic pathways
pcaa01110
Biosynthesis of secondary metabolites
pcaa01120
Microbial metabolism in diverse environments
pcaa01200
Carbon metabolism
pcaa01230
Biosynthesis of amino acids
pcaa01240
Biosynthesis of cofactors
pcaa04981
Folate transport and metabolism
Module
pcaa_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V6L78_07610 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V6L78_07610 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V6L78_07610 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V6L78_07610 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V6L78_07610 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V6L78_07610 (glyA)
Enzymes [BR:
pcaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V6L78_07610 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WWL85758
LinkDB
All DBs
Position
complement(1640244..1641497)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPYADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAQTMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
ccagcggtcatggaggctcagggttcggttctgaccaacaagtacgccgaaggttaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtggttgagcagttggctatcgac
cgtgccaaagaactgttcggcgccgattacgccaacgtccagccgcacgccggttcccaa
gccaacagcgccgtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcgtcctccggcaagctgtac
aacgccgttcagtacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcagttgaacacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccacgtttccgcgctatcgccgacaaggttggtgcgtacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccttacgct
gacgtcgtgaccaccacgacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgctgtattcccaggcgcccaa
ggcggcccgctggagcacgtgatcgccgccaaagcgatctgcttcaaggaagccctgcag
cctgagttcaagacctaccagcaacaagtggtcaagaacgcccagaccatggccagcgtg
ttcatcgagcgcggtttcgacgtagtctccggcggtaccgagaaccacctgttcctgctg
tccctgatcaagcaggacatttccggtaaagatgctgacgctgccctgggcaaagccttc
atcactgtgaacaaaaactccgtgccgaacgacccacgttcgccgttcgtcacctccggc
ctgcgcttcggtactccggctgtgaccactcgcggcttcaaggaagcagagtgcaaggaa
ctggcaggctggatctgcgacatccttgctgacctgaacaacgaagccgtgatcgacgcg
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtgtacggcgcttga
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