KEGG   Pseudomonas canadensis: V6L78_07735
Entry
V6L78_07735       CDS       T10710                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pcaa  Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:pcaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcaa02048]
    V6L78_07735 (hsdR)
Enzymes [BR:pcaa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     V6L78_07735 (hsdR)
Prokaryotic defense system [BR:pcaa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   V6L78_07735 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C DUF4145 HSDR_N AAA_19 SLFN-g3_helicase UvrD-helicase SNF2-rel_dom AAA_34 AAA_11
Other DBs
NCBI-ProteinID: WWL85783
LinkDB
Position
complement(1673893..1677357)
AA seq 1154 aa
MAENSNFAFFKEHDPVFFQLANAAERVFSSDPNTTLIKLRQLGEALAQDLAVRAGIEFDA
TTSQADLLFRLSREIQLDGNIRNLFHTLRIEGNKATHEFRTQHREALDGLRVARALAIWY
HQSFGTGGNTFKPGPFMVPADPSEPLRELQGQIEKLRAELGDSRQQLENNHQLAELLAQE
KHEQASLVGQMNEEARVYEQIALEREAELSKARVDFEARLKVLQQQLEDQPQAAQQVTRK
TQQASSQFDLNEDLTRILIDQQLNDAGWEADSLDITYSKGARPEKGKNKAIAEWPTSKPK
ENADYVLFAGLIPVAIVEAKRKRVNVADRIPQAERYSRQLIVTDNLQPAGQNTGWADGQG
GHFKVPFAFACNGRPFIKQLAELSGTWFRDLRSPANLRRPLQDFHTPSGLLDLLKRSRED
AEAKLHQEGFAYLKLRDYQENAIRAVEQALAANRRNCLLAMATGTGKTRTIIGLMYRLLK
AERFRRILFLVDRSALGEQAIEAFNEATLEQNHTLAQIYDVKELGDMAAEAETRVQVATV
QAMVKRIFQSDTPPPIDAFDCIIVDEAHRGYTLDQEMTEGELAVRDFNQYLSQYRRVLDY
FDACRVGLTATPAKHTSEVFGAPIYTYSYREAVADDWLIDHEPPIRYQTLLSQNGIHFAK
GESVSVIDTSTGEVDVAELEDELDFEIESFNRRVITPGFDKVICEQLAQELDPSGDEKTM
IFCVNQAHAERVKNLLDETFKDVHGEDYNQAAVQIITGQSDKVKQLIRQYKNERYPSIAI
TVDLLTTGIDVPRICHLVFMRRVRSRILYEQMKGRATRRCDEIGKTVFKIYDPVDLYAAL
EPVDTMKPLVKDPSISLEQLVSELTNPASLDAPGSQPDTSHAHDVLDQLSQRVMRILRKA
SHKAEQKPTLKAKLAELENAWGIAPDKLHQHLHQLGPRQAAQFIQQHAQLLNQLATVNAL
LGSLNYPVISTHMDELMVREQNYGEYQKPADYLESFNDFIKNQLNQSVALGVVVNRPQDL
TREQLREVRLLLDGHGYSEVNLQSAWRNQTNQEIAASIVGFIRRAALGEALLPFEQRVTK
AMETIYTLQPWTQIQRKWLDRLAKQLVHEVVIDKKQIGEAFKSDGGSTRLDKMLGGNLGV
VLDALNDNLWAQTA
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggcagagaacagcaacttcgcgtttttcaaagaacacgatccagtttttttccaacta
gccaatgcggccgagcgagtattttccagtgaccccaacacaaccctgatcaaactgcgc
cagttgggcgaagcactcgcccaggatctggcggtaagagcaggcattgagttcgacgcc
accacttcccaagctgatctgctgttccgcctgagccgtgaaatccagctcgacggcaac
atccgtaacctattccatacgctacgcatcgaaggcaataaggctacccacgaattccgc
acccagcatcgtgaggcactggacgggctgagggtcgcccgtgccttggcgatctggtat
caccagtcattcggcacgggcggcaacaccttcaagcccgggcctttcatggttccggcc
gatccgagtgagcctctacgtgagctgcaggggcagatcgaaaaacttcgcgcagagctg
ggcgacagtcgccagcaattggagaacaaccaccaattagccgagctactggcgcaagaa
aagcatgagcaagccagtcttgttgggcagatgaacgaggaagctcgcgtctacgagcag
attgcccttgaacgcgaggcagaactatcgaaggcccgagtcgatttcgaggcgcggctg
aaagtgctgcaacaacagcttgaagatcagccgcaagctgcccagcaggtcacgcgtaaa
actcagcaggcaagcagccagttcgacctcaatgaagacctcacccgtattctcatcgat
caacagttgaacgatgccggctgggaagccgattcgctcgacattacctacagcaagggc
gctcggcccgagaagggcaagaacaaggccatcgccgaatggccaaccagcaagccaaaa
gaaaacgcggattacgtgctgttcgccggcctaatcccagtcgccatcgtcgaagctaaa
cgcaagcgcgtcaacgtagcggaccgcattccccaagccgagcgctattcacgccaactg
atcgttaccgacaatctgcaaccggccgggcagaacacgggctgggcggatggccagggt
ggccacttcaaagtcccgtttgcctttgcctgcaatggccggcccttcattaagcagctc
gccgagctgtctggcacctggtttcgtgacttgcgcagcccggccaacctgcgccggccg
ctgcaggacttccacacaccgagtggcctactcgacctgctcaaacgcagccgtgaagac
gccgaggcgaagctacatcaggaaggcttcgcctatctcaagctgcgtgactatcaggaa
aacgccatccgcgccgtcgagcaggccctagccgccaatcgccgcaactgcctgctggcc
atggcgaccggaaccggcaaaacgcgcacgatcattggcttgatgtaccgcctgctgaag
gccgagcgctttcgccgtattcttttcctggtcgatcgcagcgccttgggggaacaggcc
atcgaagccttcaatgaggcgacgctggaacagaaccacacgctggcgcagatctacgac
gtcaaagaactcggcgacatggctgccgaagctgaaacacgggttcaggtcgccaccgtg
caggccatggtcaagcgcatcttccagtcggacactccgccgcccatcgatgccttcgat
tgcatcatcgtcgacgaagcccaccgcggttacaccctcgatcaggaaatgactgaaggc
gagctggcagtgcgcgacttcaaccagtatctatcgcagtatcgtcgcgtactcgactac
ttcgacgcctgccgcgtcgggctcaccgctaccccagccaagcacaccagcgaagttttt
ggggctccgatatacacctacagctaccgtgaggccgtggctgacgactggctgatcgat
cacgaacctccaatccgctaccagaccctgctgagccaaaacggcatccactttgcaaag
ggcgagagcgtcagcgtcatcgatacgagtaccggcgaagtggatgtcgccgagcttgag
gacgaactcgacttcgaaatcgagtccttcaatcgccgcgtgattacgcccggtttcgac
aaggtcatctgcgagcaactggcacaagagctcgacccatcgggcgacgaaaaaacgatg
atcttctgcgttaaccaggcccatgccgagcgggtcaaaaacctcctcgacgaaaccttc
aaggacgttcacggcgaggattacaaccaggcggctgtacagatcatcaccgggcaaagt
gacaaggttaaacaactgatccgccagtacaagaacgagcgctacccgagcattgccatc
acggttgacctgttgaccaccggtatcgacgtaccgcgcatttgccacttggtgttcatg
cgccgggtgcgttcgcgcattctctacgaacagatgaagggccgcgcgactcgccgctgc
gatgaaatcggcaagacggtatttaagatctacgacccagttgacctgtacgctgccctc
gaaccagtagatacaatgaagccgctagtgaaagacccaagcatcagcctcgaacagctg
gtcagcgagctaaccaacccagccagcctcgatgctcctggtagccagccagacactagc
catgcccacgacgtcctggaccagctcagccagcgggtcatgcgtattctgcgcaaggcc
agccataaggccgagcaaaagccaaccctaaaggccaagctcgccgaactggagaacgcc
tggggcatagccccggacaaactgcatcagcacctgcaccagctcggcccacggcaagct
gcccagttcatccaacagcacgcccaactgctcaatcagctcgccacagttaatgccctg
ctgggatcgctgaactacccggtgatctccactcacatggacgaactgatggtgcgtgag
cagaactacggcgaataccaaaagcccgcggactatctggaaagcttcaacgacttcatc
aagaatcagttgaaccagtcggtcgccctcggcgtagtggtcaaccgcccgcaagacctg
acccgtgaacaattgcgcgaagtacgcctgctgctcgacgggcatggctacagtgaggtg
aacctgcaaagcgcctggcgcaaccagacgaaccaggaaatcgctgccagtatcgtgggc
ttcatccgccgcgccgccctcggagaggctttgctaccattcgagcagcgcgtaaccaag
gcgatggagacgatttataccctgcagccttggactcaaattcaacgtaagtggctggac
cgcctggccaagcagctggttcacgaggtcgttatcgacaagaagcagattggtgaagcg
ttcaaaagcgatggcggcagcacgcggctggacaaaatgctcggcggcaacctaggtgtg
gtgctggatgccttgaatgacaacctttgggcacaaacggcatga

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