Pseudomonas canadensis: V6L78_10025
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Entry
V6L78_10025 CDS
T10710
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6L78_10025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_10025
Enzymes [BR:
pcaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
V6L78_10025
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6L78_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
AfAlkA-like_TBP-like
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WWL86201
LinkDB
All DBs
Position
2159604..2160467
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AA seq
287 aa
AA seq
DB search
MRLAYQPPYDWAAMMGFLSARAIGGMETVEAGVYRRSISLGGQHGWISVALGDGDWLDVE
VDFPDPAALPEIERRLRTMFDLDAQPQLINPQLATDSLMAQLVAARPGLRVPGTWDGLEL
AIRAVLGQQITVVAAIRLAGKLVAQYGQPLATPHVGITHVFPTAEVLAAADLATLGMPKA
RGRTLSGVAQALLDDPRLFEPQASLKAGVARLVALPGIGDWTAQYIAMRQMREADAFASG
DIGLINALVALEGGPVSARQLLARAEAWRPLRAYAAQHLWTSLQRAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagactggcgtatcagccgccctacgactgggcggcaatgatggggtttctgtcggcg
cgggcgatcggcgggatggagacggtcgaggcgggggtgtaccggcgcagtatcagcctc
ggcgggcagcacggctggatcagcgtggcactgggggatggcgattggctagacgtggag
gtggattttccagacccggcggcgttgcctgagatcgaacggcgcctgcgcacgatgttc
gatctggatgcccaaccccagttgatcaacccgcaactggcgacggactcattgatggcg
caactggtcgcagcgcgtccgggcttgcgtgtgccgggcacctgggatggtctggagctg
gcgattcgcgcggtgctgggccagcaaatcaccgtggtggccgcgattcgtctggcgggt
aagttggtggcgcagtatggtcagccgttggcaacgccgcatgttggtatcacccatgtg
ttccccaccgccgaggtgttggcggcggcggacctggcgacgctgggcatgcccaaggcg
cgtgggcggaccttgtcgggtgtggctcaggcgttgctggatgatccccgattgttcgaa
ccacaggccagcctcaaggccggtgtggcgcggttggtggcgttgccggggattggcgac
tggaccgcgcagtacatcgccatgcgccagatgcgcgaggcggatgcgtttgcgtcgggg
gatatcgggttgatcaatgcgttggtggcgttggaaggtgggccggtttcggcgcggcag
ttgttggcgcgggctgaggcttggcgaccgctccgggcgtatgcggcgcagcatttgtgg
acgtcgttgcagcgggcggattga
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