Pseudomonas canadensis: V6L78_10280
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Entry
V6L78_10280 CDS
T10710
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00061
Fatty acid biosynthesis
pcaa00071
Fatty acid degradation
pcaa01100
Metabolic pathways
pcaa01212
Fatty acid metabolism
pcaa02024
Quorum sensing
pcaa04146
Peroxisome
Module
pcaa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
V6L78_10280 (fadD1)
00071 Fatty acid degradation
V6L78_10280 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6L78_10280 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L78_10280 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcaa01004
]
V6L78_10280 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcaa04147
]
V6L78_10280 (fadD1)
Enzymes [BR:
pcaa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
V6L78_10280 (fadD1)
Lipid biosynthesis proteins [BR:
pcaa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
V6L78_10280 (fadD1)
Exosome [BR:
pcaa04147
]
Exosomal proteins
Exosomal proteins of breast milk
V6L78_10280 (fadD1)
Exosomal proteins of breast cancer cells
V6L78_10280 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
WWL86249
LinkDB
All DBs
Position
2208859..2210550
Genome browser
AA seq
563 aa
AA seq
DB search
MNEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPNAIKFNDVLAKGNGQPVNDASPASGDVAVLQYTGGTTGVAKGAMLTHRSLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCGICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTVCKVIADDGTELALGETGELCVKGPQVMKGYWQ
RQDATDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKDQVMEHMRANVTAYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacttttggaaggataagtaccccgccgggattgctgcagaaatcaatcca
gacgagtatccgaatattcaggcggtactgaagcagtcctgccagcgcttcgccaacaaa
ccggctttcagcaacctgggcaagaccatcacctacggtgagttgtacgaattgtccggc
gccttcgccgcgtacctgcaacagcacaccgacttgaagcccggcgatcgcatcgccgtg
caactgcccaacgtcctccagtacccggttgccgtgtttggtgccatccgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccaattcaacgac
tccggtgccaaggccctcgtctgcctggccaacatggcgcacctggcggaaaaggtcgtg
cccaagaccgccgtcaagcatgtgatcgtcaccgaagtcgccgacctgttgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaaaatggtcccggcctatcac
ttgcccaacgcgatcaaattcaacgacgtgctggccaaggggaacggccaaccggtcaac
gatgccagcccggccagtggcgatgtggcggtgctgcaatacaccggcggcaccaccggc
gtggccaagggcgcgatgctcacccaccgcagcctggtcgccaacatgttgcagtgcaag
gcgctgatgggctccaacctcaatgaaggttgcgagatcctgatcaccccgctgccgctg
taccacatctatgcgttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagtggatttgtcggcctgaacacgctgttcgtggcgctgtgcaacaacgaggcattc
cgcaagctggacttctccgcgctgaaagtcaccctgtccggcggcatggccctgcaattg
gccgccgctgagcgctggaaggccgtgaccgggtgtggcatctgcgaaggctacggcatg
accgaaaccagcccggtggccaccgtgaacccaatccagcacatccagatcggcaccatc
ggcattccggtgccgtctaccgtgtgcaaagtcatcgctgacgacggcactgaacttgcc
ctgggtgaaaccggcgagctgtgcgtcaagggcccgcaagtgatgaagggctactggcag
cgccaggacgccaccgacgaaatgctcgacagcgaaggctggctcaagaccggtgacatc
gcgatcatccagcccgacggctacatgcgcattgtcgaccgtaagaaggacatgatcctg
gtttcgggtttcaacgtgtaccccaacgagctggaagacgtgctggcaggcctgccgggc
gtgctgcagtgcgcggccatcggtgtgccggacgagaagtccggggaacacatcaagctg
tttatcgtggtcaagccgggcgctaccctgaccaaggaccaggtgatggagcacatgcgc
gccaacgtcaccgcctacaaagtgcccaaggccgtggagttccgcgatgcattgccgacc
accaacgtgggcaagatcctgcgccgtgagttgcgtgatgaagagttgaagaagctcggt
cttaaaaagtaa
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