Pseudomonas canadensis: V6L78_10575
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Entry
V6L78_10575 CDS
T10710
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaa03000
]
V6L78_10575
Transcription factors [BR:
pcaa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
V6L78_10575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
HTH_22
HTH_11
TetR_C_6
HTH_36
CcdB
HTH_Tnp_1_2
LacI
Motif
Other DBs
NCBI-ProteinID:
WWL86307
LinkDB
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Position
complement(2265468..2266094)
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AA seq
208 aa
AA seq
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MTAPQRLTDRKREAIVAAAIAEFRENGFEVTSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILHQLWASSVAQLDVSYTSDRPLREQLRGLLEAKMKMMADANFLDLARVAIAATIHSPER
AQDMVTRLSKREEGFTQWVRAAQDDGRLNCSDPAFAAHQIQSLLKAFAFWPQITLGQPVL
DAASQASVIESAIDLFLAGYEVTSPRQP
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccctcaacgcctcaccgaccgtaaacgcgaagccatcgtggccgcggccatc
gctgaatttcgcgaaaacggtttcgaggtgaccagcatggacaagatcgccgccaccgcc
ggcgtttccaagcgcacggtgtacaaccacttccccagcaaagaagagttgttcgccgaa
attctccatcaactatgggccagcagcgttgcgcagctcgacgtcagctacaccagcgac
cgcccgctgcgcgaacaattgcgcggcttgctggaagcgaagatgaagatgatggcggat
gccaatttcctcgacctggcccgggttgccatcgccgccaccatccattcgccggagcgc
gcgcaagacatggtcacccgcctgagcaagcgcgaagaaggttttacccaatgggtacgc
gccgcccaggacgatggccggctcaattgcagcgacccggcatttgccgcccaccagatc
cagagcctgctcaaggcgtttgcattctggccgcagattaccctgggccaaccagtcctg
gacgccgccagtcaggccagtgtgatcgaatcggctatcgacctgttcctggctggctac
gaagtcacgtcgccccggcagccgtaa
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