Pseudomonas canadensis: V6L78_11000
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Entry
V6L78_11000 CDS
T10710
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa03030
DNA replication
pcaa03430
Mismatch repair
pcaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6L78_11000
03430 Mismatch repair
V6L78_11000
03440 Homologous recombination
V6L78_11000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcaa03032
]
V6L78_11000
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_11000
Enzymes [BR:
pcaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6L78_11000
DNA replication proteins [BR:
pcaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6L78_11000
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6L78_11000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
HolB_lid
AAA_5
nSTAND3
TsaE
iSTAND
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWL86386
LinkDB
All DBs
Position
2357798..2358787
Genome browser
AA seq
329 aa
AA seq
DB search
MAEAYPWQDSLWQQLAGRAQHAHAYLLHGPVGIGKRDLAERLMASLLCQRPVSLEACGEC
KSCLLLKAGSHPDNYLLEPEEADKAIKVDQVRDLVSFVVQTAQMGGRKVVLIEPVEAMNI
NAANALLKSLEEPSGDTVLLLVSHQSSRLLPTIRSRCVQQACPLPSEAMSLEWLAQALPD
CSQDERVELLTLAAGSPLAAVKLQAQGVREQRALVVEGVKKLIKQEVSATQLAESAWKDI
PLLLLFDWFCDWSSLILRYQLTQDENGLGLPDMRKVVQYLAQKSAQDKVLTIQDWILAQR
QKVLGKANLNRVLLLEALLVQWVGLLGRR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagcctatccgtggcaggacagcctgtggcaacaactggccggccgcgcgcag
cacgcccacgcctacctgttgcatgggccggtcgggatcggcaagcgtgacctggccgag
cgcctcatggccagcctgctgtgccagcgcccggtcagcctggaagcctgcggcgagtgc
aagtcctgcctgctgctcaaggccggcagtcatccggataactacctgttggagcccgag
gaagccgacaaggcgatcaaggtcgaccaggtgcgcgacctcgtcagcttcgtggtgcag
actgcgcagatgggcgggcgcaaggtcgtgttgatcgaaccggtggaggcgatgaacatc
aacgccgccaacgccttgctcaagagcctcgaagagccgtccggcgataccgtgctgttg
ctggtcagccaccagtccagccgtttgttgccgaccatccgcagccgttgtgtacagcaa
gcgtgcccgctgccgagcgaggccatgagcctcgaatggctcgcacaggcgttgccggac
tgcagtcaggacgagcgggtcgaactgctgaccctggcggccggttcgccattggcggcg
gtcaagctgcaagcccagggcgtgcgtgaacaacgcgcgctggtggtggaaggcgtgaag
aaactcatcaagcaggaagtgtccgccactcaactggccgaaagcgcctggaaggacatt
cccctgctgctgctgtttgactggttctgcgactggtcgagcctgatcctgcgctaccag
ctgacccaggatgaaaacggcctgggcctgccggacatgcgcaaagtggtgcagtacctg
gcgcagaaaagtgctcaggacaaggtgctgacgatccaggactggatcctcgcccagcgc
cagaaggtactcggcaaggccaaccttaaccgcgtgctgttgcttgaggcgttgctggtg
cagtgggttggcttgctcggccgccgttaa
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