Pseudomonas canadensis: V6L78_12650
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Entry
V6L78_12650 CDS
T10710
Name
(GenBank) response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02020
Two-component system
pcaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6L78_12650
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L78_12650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcaa02022
]
V6L78_12650
Two-component system [BR:
pcaa02022
]
OmpR family
QseC-QseB (quorum sensing)
V6L78_12650
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
DUF6213
VpsR
Motif
Other DBs
NCBI-ProteinID:
WWL86698
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Position
2723658..2724338
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AA seq
226 aa
AA seq
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MHVLVCEDDELIASGIVAGLTAQGFTVERVASAGAARAMLRAATFDIMVLDLGLPDEDGL
KLLQQQRSQGLEIPVLILTARDSVTNRVDGLQAGADDYLLKPFDLRELAARLQTLLRRVA
GRSVNLIEHGRLAYDPSSRETFLGGEPVDLSRREQALLQALLHNKGRVLSSEQLKDSVYG
FNDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGGEDAS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtactggtctgtgaagacgacgaactgatcgccagcggcatcgtggccggtctg
actgcccagggctttaccgtcgagcgcgtggcctcggctggcgccgcgcgcgccatgctc
agggcggccacgttcgacatcatggtgctcgacctcggcctgccggacgaagacggcctc
aagctgctgcagcaacagcgcagccagggcctggagattccggtactgatcctcaccgcg
cgggattcggtgaccaaccgtgtcgacggcctgcaagccggcgccgatgactacctgctc
aaacccttcgacctgcgcgaactcgctgcccgcctgcaaaccctgctgcgccgtgtggcg
ggacgcagcgtcaacctgatcgaacatggccgcctggcctacgaccccagcagccgcgag
accttcctgggcggcgagccggtggacctgtcacgccgcgaacaggcgctgttgcaagcc
ctgctgcacaacaagggccgggtgctgtccagtgaacaactgaaggacagcgtctacggt
ttcaacgacgagttggaaagcaacgccctcaacgtgcatatccaccacctgcggcgcaaa
ttgggcaatggcatcgtcgagaccgtgcgcggcctcggctatcgcctgggccctgcggat
gggggcgaggacgcatcgtga
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