Pseudomonas canadensis: V6L78_13405
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Entry
V6L78_13405 CDS
T10710
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaa03000
]
V6L78_13405
Transcription factors [BR:
pcaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
V6L78_13405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
ARB_05566_C
VWA_3
Motif
Other DBs
NCBI-ProteinID:
WWL86845
LinkDB
All DBs
Position
complement(2877980..2878891)
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AA seq
303 aa
AA seq
DB search
MQIKWLDDLLAIAEWKNFSRAAEMRCVTQSALSRRIRSLEEWVGVELVDRGTYPVQLTAA
GVAFCSESRDALAGLMRLRASLREVERMPGRSIQVTAGHSLSMTFLPKWLAQFQRHTEQF
NARVVAANIHDAVIALEEGSCDLMIVYHHPLAPILLDAERFGSLALGHDAFIPLCAPDKR
GRPLYRLPGNAGKTVPHLAYTATTFLGRVAEIVIKNGPAPTVLERCYEADMAMLLMRMAI
EGYGVAWLPQSAVVDELERGLLVRAGGEEWSTRLEIRSYCAVENQNPTMRKLWRTLEGWR
ADD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaaatggttggatgacctcctggccatcgccgagtggaagaacttttcccgc
gccgccgaaatgcgctgcgtgactcaatcagccttgtcgcggcgcattcgttcactggaa
gaatgggtgggtgtcgagttggtcgaccgtggcacctacccggtgcaacttaccgccgca
ggcgtcgccttctgcagcgaaagccgcgacgccctggccggtctgatgcgcctgcgcgcc
agcctgcgtgaagtggaacgcatgccgggccgctcgatccaggtgaccgccggccacagc
ctgtcgatgaccttcctgcccaagtggctggcacagtttcaacggcacaccgaacagttc
aatgcgcgcgtagtggcggcgaatattcatgatgcggtgattgcgctggaagaaggcagc
tgtgacctgatgatcgtctaccaccacccgctggcgccgatcctgctggatgcggagcgc
ttcggcagcctggcgttgggacatgatgcattcatcccgctgtgcgccccggacaaacgc
ggtcgaccgctgtatcgcctaccggggaatgcagggaaaaccgtcccgcacctggcgtac
accgccactacgttcctgggccgagttgcggaaatcgtgatcaagaacggccctgctccc
actgtgctggaacgctgctacgaagccgacatggccatgctgctgatgcgcatggctatc
gaaggttatggcgtagcgtggctgccgcagagcgcggtggtggatgagttggaacgtggg
ctgctggtgcgtgccgggggagaggaatggagtacgcggttggagattcgctcgtattgc
gcggttgaaaaccagaacccgacgatgaggaagttgtggcgcacgctggaaggctggcgt
gcagacgattga
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