Pseudomonas canadensis: V6L78_16965
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Entry
V6L78_16965 CDS
T10710
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L78_16965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_16965
Transporters [BR:
pcaa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
V6L78_16965
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_22
SMC_N
AAA
AAA_16
Rad17
ABC_ATPase
AAA_28
NACHT
nSTAND_NTPase5
Mg_chelatase
AAA_29
AAA_14
ATPase_2
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
WWL81613
LinkDB
All DBs
Position
3619930..3620961
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AA seq
343 aa
AA seq
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MTAITIRLQGCRKAFADGTVAVHDLNLTVEGGETLAILGPSGCGKTTTLRLIAGLERPDL
GQVLFGDQDVTRLPIERRDVGMVFQNYALFPNLDVAGNIVYGLKIRGMSVTERNKRCDEL
LELVGLQHHGKRSIHELSGGQRQRVALARALAPRPKVLLLDEPLAALDAQLRERLRSELN
ELLRGLGITSVFVTHDQGEAMALGDRILVMEHGRVAQLASPRDIYQKPANAFVAGFVGNL
NAFTVIEPSAHGLKVCGGELPWQAAELPSTVYCRPEHLKVMEGEGHLHGHLLAQFFQGAQ
SRLLVDVGGPQPLLVDSSDNQLYAVGAPIALAIAPHMLFTLNA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctatcactatccgcctgcaaggctgtcgcaaggcgttcgccgacggcaccgtg
gccgtgcatgacttgaacctgaccgtcgaaggcggcgaaaccctggcgattctcggcccg
tccggctgtggcaaaaccaccaccttgcgtctgattgccggcctggagcgcccggatctg
ggccaggtgttgtttggcgatcaggacgtgacgcgcctgcccatcgagcgccgtgacgtg
ggcatggtgttccagaactacgcgttgtttcccaacctggatgtggcgggaaacatcgtc
tacggcttgaagattcgcgggatgtcggtgactgagcgcaacaagcgctgcgacgagttg
cttgagctggtgggcttgcagcatcacggcaagcgcagcatccatgaactctccggtggt
cagcgtcagcgcgtggccctggcccgtgccttggcgccgcgtccgaaagtgctgttgctg
gatgaacccttggcagccctcgacgcgcaattgcgcgaacgcctgcgcagcgaactgaat
gaactgctgcgcggccttggcatcacttcggtgttcgtcacccacgaccagggcgaagcc
atggccctgggcgaccgcatcctggtcatggagcacggccgtgtcgcgcaactggccagc
ccgcgtgacatctaccagaaacccgccaacgccttcgtcgcgggcttcgtcggcaacctc
aatgcgttcaccgtgatcgagccttcggcccatggcttgaaagtctgcggcggcgagttg
ccgtggcaggccgccgaactgcccagcacggtttattgccgtcccgaacacctgaaggtg
atggagggagaagggcacctgcacggccatctgctggcgcagtttttccagggcgcacaa
agccgtttgctggtggatgtgggcggcccgcaaccgctgctggtcgacagcagcgacaac
cagctgtacgccgtcggcgcgccgattgccctggcgattgcgccgcacatgttgtttacc
ctgaatgcttga
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