KEGG   Pseudomonas canadensis: V6L78_17125
Entry
V6L78_17125       CDS       T10710                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pcaa  Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:pcaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcaa03000]
    V6L78_17125
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcaa02044]
    V6L78_17125
Transcription factors [BR:pcaa03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    V6L78_17125
Secretion system [BR:pcaa02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   V6L78_17125
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 GAF_2 AAA_2 AAA_16 HTH_28 GAF AAA_7 AAA HTH_50
Other DBs
NCBI-ProteinID: WWL81645
LinkDB
Position
3651670..3653202
AA seq 510 aa
MRESRPTQEPQSQAYLDALLGWFVRLGADGDEITLPGLCVAAVAQLSQCELSQWYWRDES
TGRLELIAQHLLGVFCSGDPVGTRDFQHEQVLHYVLSHKTALSLEDLTGSVYECGFLPAL
ETPWEALSCVPLFNRDKAINGVLLLASQCRRNLQDYSLSLSQLGSFALTQRALLKSQCST
GSIALLNDRKPAPRAEFGLIGSSTAMDQTYRLIGKVMQTPYTVLLRGETGTGKEVVARAI
HSAGPRKSKAFVVQNCAAFPEGLLESELFGYRKGAFTGAERNHVGLFDAAHGGTLLLDEI
GDMPLSLQAKLLRVLQEGEVRPLGATAAHKVDVRIIAATHRDLCAMVAQGSFREDLYYRL
AQFPIELPPLRERDGDVLLLARDFSQQASIALGRVPVSWSSAALDQLSSYAFPGNVRELK
CLVERAVLLCDDGVILPVHLSLPAPPANDSVDATLRQRLERVERVFLIDCLHKNRGNRTR
TARELGVARRTLLYRLARLKIPVGDVREEG
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgagggagagccgacccacccaggagccccaatcacaggcatacctcgacgcgttgcta
ggctggttcgttcgtttgggtgccgatggcgacgaaatcaccttgcccgggctctgtgtt
gcggctgtggcgcagttgagccaatgcgaactcagtcagtggtactggcgcgatgagtcc
actggccgactcgaactgattgcccagcatttgctcggagtgttttgttctggcgatcca
gtcggaaccagggactttcagcatgagcaggtgttgcactatgtactcagccataaaacg
gctctaagcctggaggacctcaccggcagcgtgtacgagtgcggatttctgccagcgctg
gagactccctgggaagcgctgtcatgcgtgccgctgttcaaccgcgacaaggccatcaac
ggcgtgttgctgcttgccagccaatgccggagaaatttgcaggactactccctctctttg
agccaactgggaagttttgccttgacgcagcgggctctactgaagagtcagtgttccaca
ggaagtatcgcccttttgaatgaccgtaaaccggcccctcgagcggagtttgggctgatc
ggcagcagtacggcgatggatcagacgtaccgcctgatcggtaaggtcatgcagacgcct
tacaccgtattgctgcgcggcgagacggggacaggcaaagaggtggtggcacgggctatc
cattctgcaggtccgcgcaaaagcaaagcgttcgtggtgcaaaactgtgcggcgtttccc
gaaggattgctggaaagcgagttgttcggctatcgcaaaggggctttcacgggagctgaa
cgcaaccatgtcgggctgtttgacgcggcgcatggaggcacgctgctcttggacgaaatc
ggcgatatgccgctgtcgctgcaggccaagttactgcgggtcctgcaggaaggcgaagtt
cgcccgctgggcgctactgcggcacacaaggttgacgtgcgcatcattgctgcgacacat
cgtgacctctgcgcgatggtagcccaaggcagtttccgcgaagacctctattacaggctg
gcgcaattccccatcgaactgccgcccctgcgcgagcgtgacggcgatgtgttgctgttg
gcgcgggatttttcgcaacaagcttccattgcacttggacgtgtgccggtgtcgtggtcc
agcgcggcccttgaccaactgtcgagctacgccttccccggcaatgttcgtgagctcaaa
tgcctggtggagcgtgcggtactgctctgcgatgacggggtgatcctgccggtgcatctt
tccttgcctgcgccaccagccaatgactccgtcgatgcgacgttgcgccaacgtctggag
cgggtagagcgggtgttcctgatcgattgtctgcacaagaaccgtggtaatcgcacccga
acggcgcgtgagctgggcgtcgcccgccgtacgctgctctatcgcctggcgcgcctgaag
attcccgttggcgatgtccgtgaggaaggctga

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