Pseudomonas canadensis: V6L78_17155
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Entry
V6L78_17155 CDS
T10710
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02025
Biofilm formation - Pseudomonas aeruginosa
pcaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
V6L78_17155 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6L78_17155 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcaa02044
]
V6L78_17155 (tssM)
Secretion system [BR:
pcaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6L78_17155 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WWL81651
LinkDB
All DBs
Position
3657268..3660603
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AA seq
1111 aa
AA seq
DB search
MNAFFKGVGTVLRKSWVYSLLLVLSSALLVWFFGPLLAVDDYRFWQSPTSRLLTISGFLL
LWGLAMVVVGARRTVWLNQPAEHERHQRQALINDEIRQVRERFKEALQALKTSRRYGERS
ERWRDELPWYLLIGEQGSGKTSLLAASGLPSALDSPETAPQGATSWCEWYFAEEAVLVEA
AGRYLSQPDPSVDEAGWSTLLDMLKRRRRSRPLNGVVVTLSVDTLSSSNEHDLERHARHV
RTRLQDIQQTLHVDVPVYLVLTQSDRLAGFAEFFDAQQGDDAEQVLGGYLGTDLVQVRAV
FESLLQRLGGELIPRLHHERNVERRGRMLDFPRQVARVGDCLCLFIEAAFSVNRNQPVNA
LRGFYLTCAKTVDVRPHFVQGLFKRVIFAEADLAGLLDPERQRIRRRHGLMALAATVVIG
AVGGVWAHSYAFNHQRLVQLRGLINTQPALPRGADESHALLALLDSRLAATQVFSPQAEA
RWIDRAGLYQGALSRPPLAAAYEHALQQQFLPYVTTLLEGRVRGSLGDREHLLDSLRAYL
MLNLRGRLDKGWLAEYVSGQWSGDSSANKRLNDHFLRLLEQPFQAPLNEELVAQARLALR
GESLMEVVYRALREQARNLEPYRLAEGPAFTRGEPPIPGFYTKKYLLLFEQQGTQMVNAI
AQDNWVLGEGTDLSVMDLRRLMLALEQRYFSEYADAWSDALSRIKLRESGSLQQGAEQLA
GLTSAQSALVQLLQQVRENTRLVSVSDRLEMEVQQVGELGAVTSRDLTRAVLPDNARRAL
QRRFEPLHQLLDEQQNPRGELTQALRLLDELQLQLSTVSRDSSPEQAAFKMARQRMDGQQ
PLLGNLRDTAARFPQPLKGWFEGIADQSWRQLLDGAYGFVNQHYQNEVYGFYAKAIQRRY
PFDAHAGSDVALGDFQAFFKPRGAMARFYESYLRPFVTVEGNRYRLRGIEGRSLPMSRLL
LEQMTKAQIIRQGFFTEDQGDWAVRFTLAPYSLDQAVSRATLRVGDQQLEYRHGPIVSMA
FHWPSEAQNGRSSLVLERGAERPLGIEKDRGAWSMFRFFDLMQSEPASGRDAQVLKADLA
GLRANYLLTSQRDPSPFHMATWRTFRLPEQL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcttcaaaggagtgggtacggtgctgcgcaaaagttgggtgtacagcttg
ctgctagtgctgtccagtgcgctgctggtgtggtttttcgggcccttgctggcggtggat
gactaccgtttctggcagagtccgacgtcccgtttgctgaccatcagcgggtttctgttg
ctgtgggggctggcgatggtcgtggtgggggcgcgtcgtaccgtgtggttgaatcagcct
gcagagcatgagcgtcatcagcggcaggcattgatcaacgatgaaatacgacaggtgcgg
gagcgcttcaaggaggcgctgcaggcgttgaaaacctcacgacgctacggtgagcgcagc
gagcgttggcgagacgagttgccctggtatctattgattggcgagcaaggcagcggcaag
accagcctgctggcggccagcggcttgccgtctgcactggactcccctgaaacggcgcca
cagggggccacgtcttggtgtgagtggtattttgccgaagaagccgtactggtcgaggcc
gcgggccgttatttgagccagccggacccgtcagtggatgaagcggggtggtcgacccta
ctcgacatgctcaagcgacggcgtaggtcgcggccactcaatggcgtagtcgtcacgttg
tcagtcgacacactttcaagcagcaatgagcacgacctggaacgtcatgcccgccatgtg
cgtacccgcttgcaggatatccagcaaacactgcacgtggatgtaccggtgtatttggtg
ttgacccagtctgaccggttggccgggtttgccgagttttttgatgctcagcagggcgat
gatgcagaacaggtcctgggagggtatctgggtaccgacctcgtccaagtgagagcagtg
ttcgagagcttgctgcaacgcctgggtggggagttgattccgcgcctgcaccacgagcga
aatgtcgagcgtcgagggcgcatgcttgattttcctcggcaggtcgcacgcgtcggtgac
tgtctatgcctgtttatcgaggcggcgttttctgtcaatcgcaatcagcctgtcaatgcc
ctgcgaggtttctatctgacgtgtgcgaagaccgtcgatgtacgtccccattttgtacag
gggctgtttaagcgcgtgatttttgccgaggccgacctggccgggctgcttgatccggag
cggcagcgcatacgtcgacgccacggattgatggcgctggcagcgactgtggttatcggg
gctgtggggggagtgtgggcgcacagttacgcgttcaaccatcagcgcctagtgcaatta
cggggactgatcaacacccagcccgccctgccgcgaggggcggatgagagccatgctttg
ctggcgctgctggacagtcgactggcggcaacccaagtgttttcgccgcaggccgaagca
cggtggatcgatcgggccggcttgtatcagggggcgctgagtaggccgccactggctgca
gcttatgaacacgccctgcagcagcagtttttgccatacgtgaccaccctgctcgaaggg
cgagtgcgaggcagcctgggtgaccgcgaacacctgctggatagcctgcgtgcctacctg
atgctcaatctgcgtgggcggctcgataagggctggctggcagagtatgtgtctggccag
tggtcgggagactcttcggcgaataagcgcttgaatgaccactttttacgactcctcgag
caaccgtttcaggcgccgttgaacgaagagttggtcgcccaggctcgcttggcattacgc
ggtgagtcactgatggaggtggtctacagggcgctgcgggagcaagcgcgaaacctggag
ccttatcgcctggccgaaggtccggcgtttaccagaggcgagccgcctataccggggttt
tacaccaagaaatacctgctgctgttcgaacagcagggtactcagatggtcaatgccatt
gctcaggacaattgggtacttggagagggtactgacctgagcgtaatggatctgcgcagg
ctgatgctggcgctggaacagcgctatttcagtgagtacgccgacgcctggagcgacgcc
ctcagtcggatcaagctgcgggaaagtggcagcctgcaacaaggcgctgaacagctcgca
ggccttacatcggctcaatcggctttggtgcagctgttgcagcaggtgcgcgaaaacact
cggttagtgtcggtttccgatcgacttgaaatggaagtccagcaagtcggcgagctgggc
gcggtgacttccagggacctgacccgagcagtgttacctgataatgcccggcgtgccttg
caacgccgtttcgagcccttgcaccaattgctcgacgaacagcagaacccaaggggcgag
ttgacgcaggcattgcgcttgctggatgagctgcaattgcaattgtcgacagtaagccgg
gacagttcaccggagcaggccgcgttcaaaatggccaggcaacggatggatggacagcag
ccgctgctgggcaacttgcgtgacacggcggctcgctttccgcagccgctcaaagggtgg
ttcgaaggcattgccgaccaaagctggcgccaactgctcgatggcgcctatgggtttgta
aatcagcactatcaaaacgaagtctatggcttctatgcgaaagccattcagcgtcgttac
ccattcgatgcgcatgcgggcagtgacgttgccctaggcgacttccaggcgtttttcaag
cctcggggtgctatggcgcgcttttatgagagctacctgcggccgttcgtcaccgtcgag
ggcaaccgctatcgcctgcgggggatagaagggcgcagcctgccgatgtcgcgcttgtta
ctggagcagatgaccaaggcccagatcattcgccaaggtttttttaccgaggatcaggga
gattgggccgtacggttcacgctggcgccctacagcctggaccaggccgtcagccgggcg
acgctgcgggtgggtgatcagcagttggaataccgccacggcccgatcgtgtcgatggcg
ttccattggccgagtgaagcgcagaatggtcgcagcagcctggtgctggagcgcggtgcc
gagcggccattgggcattgagaaggaccgtggcgcctggtcgatgttccggtttttcgac
ctgatgcaaagcgagcccgcgagcggcagggatgcgcaggttctcaaggctgacctggct
ggcctgcgggccaattacctgctcaccagtcaacgcgacccgagcccattccatatggcg
acgtggcgcaccttccgcctgccggagcaattgtga
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