KEGG   Pseudomonas canadensis: V6L78_17240
Entry
V6L78_17240       CDS       T10710                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
pcaa  Pseudomonas canadensis
Pathway
pcaa00061  Fatty acid biosynthesis
pcaa00071  Fatty acid degradation
pcaa01100  Metabolic pathways
pcaa01212  Fatty acid metabolism
pcaa02024  Quorum sensing
pcaa04146  Peroxisome
Module
pcaa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:pcaa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    V6L78_17240
   00071 Fatty acid degradation
    V6L78_17240
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    V6L78_17240
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    V6L78_17240
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:pcaa01004]
    V6L78_17240
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcaa04147]
    V6L78_17240
Enzymes [BR:pcaa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     V6L78_17240
Lipid biosynthesis proteins [BR:pcaa01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   V6L78_17240
Exosome [BR:pcaa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   V6L78_17240
  Exosomal proteins of breast cancer cells
   V6L78_17240
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: WWL81668
LinkDB
Position
3680357..3682060
AA seq 567 aa
MNAVSLEHTERIWLNAYLPGVPADIDAAIEEYPSLREVFLEHLEKFRERVAYVSIGTEMT
YADWQVQGYAFAAWLQGQGVKKGDRVALMMPNCLQYPICLLGTILTGAVVVNVNPLYTSH
ELKHLLKDSGAETVVIFENFAHTLEKVITGSSVKRVVIAAIGDLLGTFKGAAMNFILRRV
QKQVPAFNLRGALRFNQVLKQGRALTHFPVEMHLDDLAFLQYTGGTTGDAKGVMLSHRNI
IANLLQAKAWVGDQLDQDKQETNVTLLPLYHIFSLTVNCLMFMCLGGRNILIANPRDVKR
VQMILRKERFNGIAGVNTLFNGLLENKEFCARDFSDLRMVIAGGMATHTAVAKRWKEVTG
LPIIEGYGLTECSPVVSISPINIARMREMEFTGSIGVPLPSTWVRFIRENGELAEVGEQG
ELQVRGPQVMQGYWKRPEATAEVLDAEGWLSTGDIGVMDARGFIRLVDRKKDMILVSGFN
VYPNEIEDVVALHPGVAEVAAIGVEDGVTGEKVKIIVVRKDPNLTQEQILAHCREYLTGY
KVPKYVEFRTTELPKTTVGKVLRRALR
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaacgctgtaagcctggaacataccgaacggatctggttgaacgcttacctgcccggc
gtcccggcggatatcgacgccgctatcgaggaatacccgtcactgcgcgaggtgttcctg
gagcacctggaaaaatttcgcgagcgagtggcgtatgtcagcatcggcaccgaaatgacc
tacgccgactggcaggtgcaaggctatgccttcgccgcctggctgcaggggcagggcgtc
aagaaaggtgatcgtgtggcgctgatgatgcccaactgcttgcagtatccgatttgcctg
ttgggcacgatcctgaccggcgcggtggtggtcaacgtcaacccgctgtacacctcccat
gaactcaagcacctgctcaaggacagcggcgcggaaaccgtggtgatcttcgaaaacttc
gcccacaccctggaaaaagtcatcaccggcagcagcgtcaagcgtgtggtgatcgcggcc
atcggcgatttgctcggcacgttcaaaggggcagcgatgaacttcatcctgcgccgtgta
caaaagcaggtgccggcgttcaacctgcgcggcgcgctacgcttcaaccaggtgctgaaa
caggggcgggcgctcactcattttccggtggagatgcacctcgacgacctggcctttctg
caatacaccggcggtaccaccggcgacgcgaagggcgtgatgctcagtcaccgcaatatc
atcgccaacctgctgcaagccaaggcctgggttggcgaccaactggaccaggacaagcag
gaaaccaacgtcaccttgttgccgctgtaccacatcttttccctgacggtgaattgcctg
atgttcatgtgcctgggcgggcgcaacatcctgatcgccaacccacgggacgtgaagcgc
gtgcagatgatcctgcgcaaggagcgcttcaacgggattgccggggtcaacaccttgttt
aacggcctgctcgagaacaaggaattctgcgcacgtgacttttccgacctgcgcatggtg
atcgcgggcggcatggccacgcatacggcggtggccaagcgctggaaggaagtcaccggg
ctgccgatcatcgaaggctacggcctcaccgaatgttcgccggtggtgagcatcagcccg
atcaacattgcgcgcatgcgcgagatggaattcaccggcagcatcggcgtgccattgccc
tcgacctgggtgcggtttatccgcgaaaacggtgagttggctgaggttggcgagcagggc
gaactgcaagtgcgcgggccgcaagtgatgcaaggttattggaaacgtccggaggccact
gccgaggtgctggatgccgaagggtggttgtcgaccggggatatcggcgtgatggacgcg
cgcggctttatccgcctggtagaccggaaaaaggacatgatcctggtctccggcttcaac
gtgtaccccaatgaaatcgaggacgtggtggcgctgcaccctggcgtggccgaagtggcg
gcgattggcgtggaagatggcgtgaccggggagaaggtcaagatcatcgtggtgcgcaag
gacccgaacctgacccaggagcagattcttgcgcattgccgggagtacctgacggggtac
aaggtgccgaagtacgtggaattccgcactactgagctgccaaagaccaccgtgggcaaa
gtcctgcgccgagcactgcgctaa

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