Pseudomonas canadensis: V6L78_17285
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Entry
V6L78_17285 CDS
T10710
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_17285
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V6L78_17285
Archaeal homologous recombinant proteins
V6L78_17285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
ATS
nSTAND3
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWL81676
LinkDB
All DBs
Position
complement(3694627..3698265)
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKEARDAHKQLQDQATGVVPLAPEARGELDQQFD
AAQTQLKTQQAQLKQLELQHTWLKELREWQERQLAATEQLQRAQAEWDNQRQQREDLGRL
DQLAPQRHQFARQAEVGSVLAPLAAQIQSHIQQQSQLHTRQEQAQQQQASAQTALAEALK
NQTDAVPLLRQAFEEQSTLAHLTKELAKRTEDKQQHDSACTEGQAQLTGLLEKQSHVAER
LQRLATELEHSTVLAPLSDAWSAYRDRLQQLMLIGNRLNKGQAELPQLEQRATSAAEQFT
QQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLTRLWDNQQQLDQHAAS
LTQKLTDAQQQREQLNQTGLQTKAELIVAEQTLNVTKQLLERQRLARSASVEELREQLQD
DQPCPVCGSHEHPYHQPEALLQSLGRHDENEEATAQKAVDSLKEKLTELRGEVGGLIAQQ
KEYLQQQEHLATQQQALQPSLDAHPLAASLLNQEAAKRSAWLEQQLGQLSQSITQDEQRQ
SALLNLQQNAGRLQQQLQAAQEASQQARQLLVDQQRELTSDRERLDQELSAFASLLPAEI
LEGLRAEPAATFMQLDQQVSQRLEQLGHQRDELAEQQERQQAIEKEQTHQQHRQHQLDAL
IQQVTELTAQQQTAQEKLSALLGEHTSAEHWQQQLDQAVTQSRQSETDANKHLQEIHNAL
IQLAADLKAQQEREQALQAEQQALVTRISEWRALHPELDDAGLTRLLAYDDAQVSQLRQQ
LQHSEKAVEQAKVLLQEREQRLADHQALHNGNLAAEELDSTLATLNQQLAESEKHCAELR
ARQSEDQRRQDANQAFAEQIAKAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgctatccgcttgaaaaacctggcttcattggctggcccgtttgaaatc
gactttaccgccgagcccctggccagtgccggattgttcgcgattaccgggccgaccggc
gccggtaaaagtaccctgctcgatgccttgtgcctggcgttgtttggcgcggtgccgcgc
ctgggcgacaccggccaggcgaagatgccggatgccgacagcgacatttccatcggcgac
ccgcgcaccctgctgcggcgtggcaccggtggcggttacgccgaagtggatttcgtcggc
gtgagtggccgtcgctatcgcgcgcgctgggaagccaatcgcgcccgcgacaaggccagc
ggcaagttgcagaatagccgccagagcctgatcgacctggacagcgaccaactgctggcc
agccagaaaaccgaatacaaaacccagctggaactggccctgggcctgaacttcgaacag
ttcacccgcgccgtattgctcgcgcaaagtgagttcagcgccttcctcaaggccaacgac
aacgagcgcagcgaactgctggaaaagctcaccgacacggccctgtatacccaactcggc
cggcgcgcgttcgacaaggccaaagaggcccgggatgcgcacaagcagttgcaggaccag
gccaccggcgtggtgcccctggcgcccgaggcacgtggggagctggatcagcagttcgat
gccgcgcaaacgcaactcaagacccagcaagcccaactcaagcaacttgagcttcagcac
acctggctcaaggagctgcgcgaatggcaggaacgccaactcgctgccaccgaacaactg
cagcgtgcacaggccgaatgggataaccagcgccagcaacgtgaagacctgggccgcctg
gaccaattggcgccacaacgtcatcagtttgcgcgtcaggcagaagtcggcagcgtgctt
gccccgttggccgcgcagattcagtcgcatatccaacaacaatcccaattgcacacccgc
caagagcaggcccagcaacaacaggccagcgcgcaaactgcgttggctgaggccctgaaa
aaccaaacggatgccgtgccattgctgcgacaggcgtttgaagagcaaagcaccctcgcc
cacttgaccaaagagctggccaagcgcaccgaggacaaacagcagcacgacagcgcctgc
accgaaggtcaggcccaactcaccgggctgctggaaaaacagagccatgtcgctgaacgc
ctgcaacgcctggcgaccgagcttgagcacagcacggtcctcgcgccactgagcgatgcc
tggagcgcctaccgcgaccgtctgcaacagctgatgctgatcggcaatcgcctgaataag
ggccaggccgaactgccgcaattggaacaacgcgcgaccagcgccgccgaacagttcact
cagcaacgcgaagccctggacctgctgtatcaggaagccggtgccgaacctcatgccgtg
gccgagcagatccaattgctggccagcctgctgcaagacaatcgcaaacagcaacgcgcc
ttcgaagacctgacgcgcctgtgggacaaccagcaacagttggaccaacacgccgccagc
ctgacgcaaaagctcaccgatgcccaacagcaacgcgaacagctgaaccagaccggcctg
caaaccaaggccgagctgatcgttgccgaacagacactgaacgtcaccaaacaactgctg
gaacgccagcgcctggcccgcagcgccagcgtcgaggagttgcgcgagcagttgcaggac
gaccaaccctgcccggtgtgcggcagccacgaacacccgtaccaccagcccgaagcgttg
ctgcaaagcctcggtcgtcatgacgaaaacgaagaagccaccgcgcagaaagccgtggac
agtctcaaggaaaaactcaccgaattgcgtggcgaagtgggcggtttgatcgcccaacag
aaggaatacctgcaacagcaggaacacctggcgacgcaacaacaagcactccagccaagc
ctggatgcgcacccgctggccgcgtcgttgctcaatcaggaagccgccaaacgcagcgcc
tggcttgagcagcaattgggccaactgagccaaagcatcactcaggacgaacaacgccaa
agcgccctgctcaacctgcaacaaaacgccgggcgcttgcagcagcaactgcaagcggcc
caggaagccagccagcaggcccgtcaattgctggtcgatcagcaacgcgaactgaccagc
gaccgtgaacgcctcgaccaggagctgagcgccttcgccagcctgttgcccgcagaaatc
ctggagggtctgcgcgccgagccggctgctaccttcatgcagctggaccagcaagtcagc
cagcgcctggaacagctgggtcaccaacgcgatgagctggccgagcaacaagaacgccaa
caggcgatcgagaaggaacagacccaccagcaacatcgtcagcatcagcttgatgcgctg
attcagcaggtcaccgaactgactgcccagcaacagacggcccaggaaaaactcagcgcg
ctgctcggtgaacacaccagcgccgaacactggcagcaacagttggatcaggccgtgacc
cagtcacgccaaagcgaaaccgacgccaacaaacacttgcaagaaatccacaacgccctg
attcaactggccgccgacctcaaggcccagcaggagcgcgaacaggcgttgcaggccgaa
caacaggccctcgtcacgcgtatcagcgaatggcgcgccttgcacccggaactcgacgac
gccggcctcacccgcttgctggcctacgatgacgctcaggtcagccaattgcgccaacag
ttgcagcacagcgaaaaagccgtcgaacaggccaaggtgttgttgcaagagcgcgaacag
cgcctcgccgaccatcaggccctgcacaatggcaacctcgcagccgaggagctggacagc
accttggccacgctcaatcaacaactggccgagagcgagaaacactgcgccgaattgcgc
gcgcgccagtccgaagaccagcgccgccaggacgccaaccaggcctttgccgagcagatc
gccaaggcctatgacgagtggcagcgctgggcacgcctgaatgcgctcatcggctctgcc
actggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcaccac
gccaacgtgcaactgcgccaactggtacggcgttatcgcctcaagcgcggcggcagcatg
ctcggcctgttggtgatggacacggaaatgggcgacgagctgcgctcggtgcattcattg
tccggcggcgaaaccttcctggtgtccctggcgctggccctgggcctggcgtcgatggcc
tccagcacattgaaaatcgaatcactgtttatcgatgagggcttcggcagcctcgacccg
gaatccctgcaattggcgatggacgcgctggatggcctgcaggctcagggccgtaaagtg
gcggtgatttcacacgtgcaggaaatgcacgaacgcattccggtgcagatccaggtcaag
cgtcagggcaatggtttgagtaccttggaggtcaagtga
DBGET
integrated database retrieval system
