Pseudomonas canadensis: V6L78_17290
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Entry
V6L78_17290 CDS
T10710
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_17290
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V6L78_17290
Archaeal homologous recombinant proteins
V6L78_17290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WWL81677
LinkDB
All DBs
Position
complement(3698262..3699503)
Genome browser
AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLNTHLPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGQCLVSVEPLLIPRSVDLQRLEAAPLADILKAL
AELPDVDLLAETQRHPWLEVRVRLDEPQPDLRQQIESALQGKAVRLVRIAAEYAGKGSRE
DEGDDRLIELDQLTPQELFSRAWQDSYGSEVDEQTLKDFAVLLQEVQQEDEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccaaaacctccacggccaggaacgc
gacttcgaacacgcctgctttcttgagtggctgctgggccaactgaacacccatctgccg
gatgtactgctgatcgccggggatatcttcgacacggtcaacccaccgctcaaggcccag
gagcgtctgtatgacttcatcatcagcgcccacgaacagaaccccaaactgacgattgtg
atgatcgccggcaaccatgactccggctcgcgtatcgaactgcccgcgccgttgatgcgc
cgcctgcgtacccacgcgctgggccgggtgctgtggctggatgacggccaactcgacgcc
gaacgcctgctgatcccgctgccggatgccaaaggcaagatcgccgcctggtgcctggcg
ctgccgttcctgcgcccggcggaagtcacgggcgcacagttgggtgacgactacctgcgc
ggtatcggccaggtgcatgaatggttgatcgccgccgctaacgccaagcgcaaaaaaggc
caggcgctgattgctatcagccatgcgcacatggccggtggttcggtgtcggaagactcc
gagcgcagcctgatcatcggcaatgccgaggcgctgccggccagtctgtttgatcgaagt
gtcgcttacgtcgccctcggccatttgcacaagccgcagaaggtcaatggcgaggaacgt
attcgctatagcggttctccgattccgctgtcgttttccgaaatcggctacaagcaccag
atcctcgacgtgaccttccagggccaatgcctggtgagtgtcgaaccgctgctgattccg
cgctcggtcgacctgcaacgcctggaagccgcgccgctggccgatatcctcaaggccctg
gccgagttgcccgacgtcgacctgctggccgaaacccagcgccacccttggctggaagta
cgcgtacgcctcgacgagccgcaacccgacctgcgccagcagatcgaaagcgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgctgaatacgcaggtaaaggcagccgcgaa
gacgaaggcgacgaccgcctgatcgaactcgaccagctcacgccccaggaactgttcagc
cgcgcctggcaggacagttatggcagtgaagtggatgaacagaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggaggatgaacagccatga
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