Pseudomonas canadensis: V6L78_18545
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Entry
V6L78_18545 CDS
T10710
Name
(GenBank) sugar diacid recognition domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcaa03000
]
V6L78_18545
Transcription factors [BR:
pcaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
V6L78_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
GAF_2
DUF6074
Motif
Other DBs
NCBI-ProteinID:
WWL81912
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All DBs
Position
3956905..3958011
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AA seq
368 aa
AA seq
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MFELDHDLAQDIVDRTMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQLVLANGRVVE
IDGQTAKHLKGVQPGINLPLLHDGRLIGVLGITGEPEGLRTYAELVRMTAEMLVSHRHQQ
AEQQWRRQRCDDLLALLLAETGDSPRLVDEAQQLGLKPQLARTPYLFELGAGQSAEALSA
WLASRYPDSWCVSSAQYSLLWCRPASVKVDNPRLLEKLEGLGWNILRVAVGGQADGLTGL
RRCYRRVGDLLAYGRDVLPQSRLLTLNRYRLPVMLWRHRNDDALDELLNPLRKVLAKDSN
GQLQATLRSWCEHDGQSQACADALGIHRNSLRYRMERIAELSGVDPLTLDGMLALYLGVQ
LLPQALSE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagctggatcatgacctggcacaggatatcgtcgatcgaaccatggcgatcctg
ccttacaacgtcaatgtcatggacagccagggcctgatcctcggcagtggtgagcccgag
cgtatcaacacccggcatgaaggcgcacaactggtgcttgccaacggccgggtggtggaa
atcgatggccagaccgccaagcacctcaagggtgtacaaccgggtatcaacctgccgctg
ctgcatgacgggcgcctgatcggcgtgctcggcatcactggcgagccggagggcctgcgc
acctacgccgaactggtgcgcatgaccgccgaaatgctggtcagccatcgtcaccagcag
gccgagcaacaatggcggcgtcagcgctgtgatgatctgctggccttgctgctggcggaa
accggcgattcgccgcgcctggtggacgaagcccagcaactggggctcaagccgcagctg
gcacgcacgccgtacctgtttgaactgggcgcggggcaatcggcggaagcgttgagtgcg
tggcttgcctcgcgttatccggacagctggtgtgtcagctcggcgcaatactcattgctg
tggtgccggccggcatctgtgaaggtcgacaacccgcgcttgttggaaaaactcgaaggc
ctcggttggaacatcctgcgcgttgccgtgggtgggcaagcggacggcctgactggcctg
cgccgttgctatcggcgtgtcggcgatctgctcgcttatggccgtgatgtgctgccgcag
tcgcggctgctgaccctcaatcgctatcgcttgcccgttatgctctggcgccatcgcaat
gacgacgcgctcgatgaactgctcaacccgctgcgtaaagtgctggccaaggacagcaat
ggtcagttgcaggcgactctgcgcagttggtgtgaacacgacgggcaaagccaggcctgt
gcggacgcccttggtattcaccgcaacagcctgcgttaccgcatggagcgtattgccgaa
ctcagcggtgtcgaccctttgaccctggacggtatgctcgccctctacctcggcgtacag
ctgctgccccaggctttgtctgaatga
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