Pseudomonas canadensis: V6L78_18895
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Entry
V6L78_18895 CDS
T10710
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa01501
beta-Lactam resistance
pcaa02020
Two-component system
Module
pcaa_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6L78_18895
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L78_18895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_18895
01504 Antimicrobial resistance genes [BR:
pcaa01504
]
V6L78_18895
Transporters [BR:
pcaa02000
]
Other transporters
Pores ion channels [TC:
1
]
V6L78_18895
Antimicrobial resistance genes [BR:
pcaa01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
V6L78_18895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
WWL81980
LinkDB
All DBs
Position
4037369..4038691
Genome browser
AA seq
440 aa
AA seq
DB search
MIKQSSLLALAVCAGISQLAFAESVTDQADAKGFIEGSSVTGLLRNYYMNRNREGGRADN
IDWTQGAMLNYASGFTQGTLGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGS
VGAAVKIKISKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTS
TNSGMTSNHDHDIYATYANIAANSASFVGGKYTFSPSLSATVYAGELEDIWRQYYTNLNY
VIALAHDQSLALDGNLYRTLDTGSAKAGAINNTTYSVAAAYSFLQAHTLTLSFQKVHGDT
PFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRY
INGSDINGTHTPDHSAYVGDYGSDGAHHETDVEAKYVIQSGPAKNLSLRVRDAIVSSNAD
QGDGKLNELRLIVDYPFTLL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacagtcgagtctgttagcactggcggtgtgtgccggtatcagtcagctggcg
tttgccgaatcggtcaccgaccaggcggatgccaagggatttatcgaaggcagcagcgtc
accgggttgttgcgcaactactacatgaaccgtaatcgcgagggtggccgggccgataac
atcgactggacccaaggcgcgatgctcaactacgcctcgggcttcacccagggcaccctt
ggtttcggcgtggatgcctacgcctacggcgggctgaaactggacgccacccacgcagac
gctggcaccggcaacctgccgaccgaccggcatggcgaccccgaagatgcctacggctcc
gtgggcgcagcggtgaagatcaagatctccaagacccaactgaaattcggtgacatgcaa
cccaccgccccggtcttcgccaccggcggcacccgcctgttgcctcagaccgccaccggt
ttcgacctgaccagcagtgaaatcgccggcctggacctggaagctgggcacttcaccagc
accaacagcggcatgaccagcaaccatgaccacgatatctatgcgacctacgccaatatc
gcggccaacagtgccagtttcgttggtggcaaatacaccttcagcccgtccctgagcgca
accgtgtatgccggcgaactggaagacatctggcgccagtactacaccaacctcaactac
gtgattgcgctggcgcatgaccagtctctggcgctggacggcaacctgtaccgcaccctc
gacacgggcagcgccaaggccggggcaatcaacaacaccacctactcggtggcggcagcc
tactcgttcctgcaggcgcacacgttgacgctgtcgttccaaaaagtgcatggcgacacg
ccgtttgactacatcggcaccggcaacaatggcgcgggtgaaggcggcgattcggtgtac
ctggccaactcggtgcaatggggggacttcaacgggccgggcgaacagtcctggggcatt
cggtatgacctgaacatggccagttatggcgtgccagggctgagtttcatggggcgctat
atcaatggctcggacatcaatggcacccacacgccggatcacagcgcctatgtgggcgac
tacggctcggatggcgcgcaccacgagaccgacgtggaagccaaatacgtgatccagagc
ggcccggcgaagaatctttcgctgcgggtgcgcgatgctatcgtctcgtcgaatgccgac
cagggcgatggcaagttgaacgagttgcggttgatcgtcgattacccgtttacgttgctg
taa
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