Pseudomonas canadensis: V6L78_18935
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Entry
V6L78_18935 CDS
T10710
Name
(GenBank) ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02010
ABC transporters
pcaa02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6L78_18935
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
V6L78_18935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_18935
Transporters [BR:
pcaa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
V6L78_18935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
ThiF
Peripla_BP_3
Glyco_hydro_3_C
Adhesin_P1_N
Motif
Other DBs
NCBI-ProteinID:
WWL81988
LinkDB
All DBs
Position
complement(4046173..4047105)
Genome browser
AA seq
310 aa
AA seq
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MNLKRIFPVIALAALMSQAVEARELKALGISMGSLGNPYFVTLADGATARAKELNPNVKV
TSVSADYDLSKQFSQIDNFISSKVDLILINAVDPSAMASAIKKARDAGIVVVAVDVDAKG
VNATVQTDNVEAGKLACQYLVDKLSGKGNVIIQNGPQVTAVTDRVKGCKAALAAAPDIKV
LSDDQDGKGSREGGLNVMQGYLTRFPKIDGLFAINDPQAIGSDLAAKQLKRSGIIITSVD
GAPDIENALKTETQIQASSSQDPWAMAQTAVNVGNDILNDKAPAEAVTLLTPKLITRDNV
ANYSGWSSKH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaaacgtatctttcccgtcattgccttggctgccttgatgtcccaagccgtc
gaagcccgtgagttgaaggccctcggtatcagcatgggctcgctgggcaacccgtatttc
gtgaccctggccgacggcgcaaccgcgcgggccaaggagctgaatcccaacgtcaaggtc
acttcggtgtcggctgactacgacctgagcaagcagttttcgcagatcgacaatttcatt
tcgtccaaggtcgacctgatcctgatcaacgccgtcgacccctctgccatggcctcggcg
atcaagaaagcccgtgacgccggcatcgtcgtcgtagccgtggatgtggacgccaagggc
gtgaacgcgaccgtgcagaccgacaacgtcgaagccggcaagctggcctgccagtacctg
gtggacaagctttccggcaagggcaatgtcatcatccagaacggcccgcaagtcaccgcc
gtgaccgaccgcgtcaaaggctgcaaggccgcgctggccgccgcgccggatatcaaggtg
ctgtccgacgaccaggacggcaaaggctcccgcgaaggcggcttgaacgtgatgcagggt
tacctcacgcgcttcccgaaaatcgacggtctgttcgcgatcaatgacccacaagctatc
ggcagcgacctggcggccaagcagctcaagcgcagcggcatcatcatcacctcggtggac
ggcgcgccggatatcgagaatgccttgaagaccgagacgcagatccaggcgtcgtccagc
caggacccttgggccatggcgcagaccgcagtgaacgtgggcaatgacattctcaatgac
aaagccccggccgaagcggttaccctgctcacgccaaaactgatcacccgtgacaacgtc
gctaactacagcggttggtcgagcaaacattga
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