Pseudomonas canadensis: V6L78_21210
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Entry
V6L78_21210 CDS
T10710
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa03030
DNA replication
pcaa03430
Mismatch repair
pcaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6L78_21210 (dnaQ)
03430 Mismatch repair
V6L78_21210 (dnaQ)
03440 Homologous recombination
V6L78_21210 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcaa03032
]
V6L78_21210 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_21210 (dnaQ)
Enzymes [BR:
pcaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6L78_21210 (dnaQ)
DNA replication proteins [BR:
pcaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6L78_21210 (dnaQ)
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6L78_21210 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WWL87376
LinkDB
All DBs
Position
complement(4592977..4593717)
Genome browser
AA seq
246 aa
AA seq
DB search
MRSVVLDTETTGMPVTDGHRIIEIGCVELMGRRLTGRHFHVYLQPDRDSDEGAIGVHGIT
DEFLKGKPRFAEVADEFFEFINGAQLIIHNAAFDVGFINNEFALMGQTDRADISQHCSIL
DTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLSLA
GNASDGSGSAEGSGNRPSEIRRLPADRKPTPIIRASEQDLAEHAARLEAIAKSAGAPALW
STLTQQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atccgatctgttgtactcgataccgaaaccaccggcatgccggtgaccgacggccaccgg
atcattgaaatcggctgtgtcgaattgatgggtcgccgcctcaccgggcgtcacttccac
gtctacctgcaaccggaccgcgacagtgacgagggcgcgattggcgttcacggcatcacc
gacgaattcctcaagggcaagccgcgtttcgctgaagttgccgatgagttcttcgaattc
attaacggcgcgcagttgatcatccataacgcggcgttcgacgtcggcttcatcaacaac
gaatttgccctgatggggcagaccgatcgcgcggatatttcccagcactgctcgatcctc
gacaccttgatgatggcccgtgagcgtcaccccggccaacgcaacagcctcgatgccttg
tgcaagcgttatggcgtcgacaactccggccgtgagcttcacggcgccttgctcgactcc
gagattcttgccgacgtctacctgaccatgactggcgggcagaccagcctgtccctggcg
ggtaacgcgtccgatggcagcggttcggcggaaggctcgggcaaccgtccttcggaaatc
cgccggttgccggctgatcgcaagccgaccccgattatccgggccagtgagcaggatctg
gccgagcatgcggcgcgtctggaggcgatcgccaagtcggccggcgcgccggcgttgtgg
tcgaccctgacccagcaatga
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