Pseudomonas canadensis: V6L78_23495
Help
Entry
V6L78_23495 CDS
T10710
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00300
Lysine biosynthesis
pcaa00470
D-Amino acid metabolism
pcaa01100
Metabolic pathways
pcaa01110
Biosynthesis of secondary metabolites
pcaa01120
Microbial metabolism in diverse environments
pcaa01230
Biosynthesis of amino acids
Module
pcaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6L78_23495
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6L78_23495
Enzymes [BR:
pcaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
V6L78_23495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WWL82865
LinkDB
All DBs
Position
complement(5126353..5127327)
Genome browser
AA seq
324 aa
AA seq
DB search
MALFYDARGNIYGVVSPVSLRDAGIAVPESAALAARTRSNWTSSAIAAECSWGSLPRPAG
AKAHRCDGLLVGPFQAEPPFDLLIVNTDGSLAERSGNGLTIFAQALTDQALMSEACELRV
HHDKSDAASPVSTRVEPAILEQVAGFWLELGRPGFGPEAVGAQRDVDETGLSHVSELAAI
DPQWATSQFVRVGNPHCVTLVEQVSALPDNTQMQQPALFEPLKAIAFAPPAGSGRPCAAG
VNLQWAARQPGNRVIARVFERGEGPTASSGTSASAVACAAWRAGWVESGEVSVVMPGGIA
PVRLLTQGETLLSVSLFGTALLQA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcactgttctacgacgcccgcggcaatatctacggcgtggtcagccccgtctcattg
agagacgcgggcattgctgtacccgagagcgctgcgctggctgcgcgtacccgcagcaac
tggacatcgtcggctatcgccgccgaatgcagttggggctcgctaccacgtccggccggt
gccaaggctcatcgctgtgatggcttgctggtcgggccgttccaggccgagccgccgttt
gacctgctgatcgtcaacaccgacggctccctggccgaacgcagtggcaacggcttgacg
attttcgcccaggcactcaccgaccaggccctgatgagcgaggcctgtgagttgcgggtg
caccacgacaaatcggacgcggcatcacccgtgtcgacacgggttgaaccggcaatcctt
gaacaggtcgcggggttctggcttgagttggggaggccgggtttcgggcccgaggcggtg
ggcgcgcagagggatgtggatgaaactggactgagtcatgtaagcgagttggctgcgatc
gacccacaatgggcaaccagccaatttgtgcgggtgggtaacccccattgcgtgacgctg
gtcgagcaggtgtcggcgttgccggacaacacacagatgcagcaacccgccctattcgaa
cccttgaaggccattgcgtttgcgccgcctgcgggtagtggtcggccctgtgcagcaggg
gtgaacctgcaatgggcggcgcgccagcccggcaatagagttatcgcacgggtgttcgag
cggggagagggccccaccgcgtcttccggaaccagcgccagtgcggtggcgtgtgccgcc
tggcgggcgggctgggtagagagtggcgaggtgtcggtggtgatgccaggtggcattgcg
ccggttcgcttgctcactcagggcgagacgttgctgagcgtcagtctgttcggcactgcg
ctgctgcaggcatga
DBGET
integrated database retrieval system