Pseudomonas canadensis: V6L78_25420
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Entry
V6L78_25420 CDS
T10710
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02020
Two-component system
pcaa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6L78_25420
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6L78_25420
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcaa01001
]
V6L78_25420
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcaa02022
]
V6L78_25420
Enzymes [BR:
pcaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
V6L78_25420
Protein kinases [BR:
pcaa01001
]
Histidine kinases
Other
V6L78_25420
Two-component system [BR:
pcaa02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
V6L78_25420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
HATPase_c_2
RNase_Y_N
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
WWL83209
LinkDB
All DBs
Position
5516224..5518533
Genome browser
AA seq
769 aa
AA seq
DB search
MDIKFAHRLSYKQARLTVLVGFVLGTLLSLIQIGIDYASEDASINREIRSLIEISHNPAS
RIAYNIDAELAQELTLGLLHSPAIIHAQLIDNNGVVLADVDRPRKESTYRPVSDFLFGAN
RQFEDRLFLSHMPNESLGVLRLDVDTYAFGSRFLHRAEITLLNGFVRSLLLTGILLGLFY
VMLTQPLVRIIRELSNRRQARLDCPPGHEHDEIGVLVNVANQQFENMETEIQQRRHAEDR
LTEYLGQLEDIVSARTLELKASNQRLSQSNDELEAAKIHALGMAQARAAFLANMSHEIRT
PLNGLLGMIALSLDSPLNAEQRQQLSIAHDSGKVLVELLNDILDLSKFDAGQLELERIPF
DLGSLVEDTANLLSQNAAPSVELTCLIDPQFPAQIMGDPTRVRQIVSNLLSNALKFTRFG
RVDVRLSAREGHVRIEVCDTGIGIAQEAQVKIFQPFTQAGAGITRQFGGTGLGLALTHNL
CEAMKGRLSISSEVGFGSQFCADLPLPTHLPAVQPLPLKGEVIAITHAGSGLTELLTTLL
PHWGLSPRCYSQDDDLSGQTPDLLITDCPECLFRLRPTLSAPILLVTAYGNFMPSEEVAA
LAPLQQQARPLSRNALYQILHRNLRSDTQLVLDPIQMEAAPLAHRARILLVEDNPVNQLV
AKGMLSKLGCEVIVAAHGGEALKFLEEQRFDLVLMDCNMPVMDGYEASRQIRRSGRWPDL
PIVALTANALSEERERCRAAGMNDYLAKPFRREELSGLLELWVPKTTTL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagttcgcccaccgcttgtcttataaacaagccagattgactgtgctggtc
ggtttcgtcttgggaaccttgctcagcctgatccaaatcggcattgattatgccagcgaa
gacgcatccatcaaccgtgaaattcgctcgctgatcgaaatcagccacaaccccgcctca
cgcatcgcctataacatcgacgccgaactggcccaggaactgaccttgggcctgcttcac
tcccccgccatcattcatgcccagttgatcgacaacaatggcgtggtgctggccgatgtc
gaccgcccgcgtaaagaaagcacttaccgccccgtgagcgatttcctattcggcgccaac
cgtcagtttgaagaccggttgttcctcagccacatgcccaacgagtccctcggtgtgctg
cgcctggacgtggacacctacgcctttggcagtcgcttcctgcaccgtgccgagatcacc
ctgctcaacggcttcgtccgcagcctgttgctgaccggcatcctgttgggcttgttctac
gtgatgctgacccagccgttggtgcgcatcatccgcgagctgagcaatcgccgacaggca
cgcctggactgcccgcccggccacgagcacgatgaaatcggcgtgttggtgaacgttgcc
aaccagcagttcgaaaacatggagacggagatccagcaacgccgccatgccgaagatcgg
ctgacggaatacctggggcaactggaagacatcgtgtccgcacgcaccctggagctcaag
gccagcaaccagcggctgagccagtccaacgatgaattggaagcggcgaagatccacgcg
cttggcatggcccaagcacgggcggcattcctggccaacatgagccacgaaatccgcaca
ccgctcaacggcctgctggggatgatcgcgctgtcactcgacagcccactcaacgccgag
cagcgtcagcaactgtccattgcccatgactcgggcaaagtgctggtggagttgctcaac
gatatcctcgacctgtccaagttcgacgctggccagttggagttggagcgcatcccgttc
gacctgggttctctggtggaagacaccgcgaacctgttgtcgcagaacgccgcgccgagt
gtcgaactgacgtgcctgatcgacccgcagtttcccgcccaaatcatgggcgacccgacc
cgtgtgcgacagatcgtcagtaacctgctgtccaacgccctgaaattcacgcgcttcgga
cgggtagatgttcgcctcagcgcgcgggagggccacgtacgcatcgaggtctgcgatacc
ggcataggcattgcgcaggaagcccaggtaaagatcttccagcccttcacccaggccggt
gccggcatcactcgccagtttggcggcacgggcctgggcctggcgctgacgcacaacctg
tgtgaagccatgaaaggccgactgagcatcagctcggaagtgggcttcggtagccagttc
tgcgccgacctgccgctgccaacccatttgcccgccgtccagccactgccgctcaagggt
gaggtcatcgccattacccatgccggcagcggcctcaccgaactgcttaccaccctgctg
cctcactgggggctgtcaccccgctgctactcgcaagacgatgacttgagcgggcaaacc
ccggacctgctgatcaccgactgcccggaatgcctgtttcgcctgcgccccaccctcagc
gcgccaatcctgctggtgaccgcctatggcaacttcatgcccagcgaggaagtcgccgca
ctcgcgccgctgcaacaacaagcgcgcccgctgagccgcaatgcgctgtatcagatcctg
caccgtaacctgcgcagcgacacgcaactggtcctcgacccgatccagatggaagccgcg
cccctggcgcacagggcgcgcatcctgctggtggaggacaatccggtcaaccaactggtg
gccaagggcatgctcagcaaactgggatgtgaggtgatcgtcgcagcccatggtggcgag
gcgctcaaattccttgaggaacaacgcttcgacctggtgttaatggactgcaatatgccg
gtgatggacggctacgaggccagtcggcagatccgtcgcagcgggcgctggccggacctg
ccgatcgttgccttgaccgccaacgcgctctccgaagaacgcgagcgttgccgggccgcg
ggcatgaatgactacctggccaagccgttccgtcgtgaggaactcagtggtttgcttgag
ctgtgggtgccgaagacgacaactctctga
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