Pseudomonas canadensis: V6L78_26190
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Entry
V6L78_26190 CDS
T10710
Name
(GenBank) DEAD/DEAH box helicase
Organism
pcaa Pseudomonas canadensis
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWL83356
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Position
5673806..5676496
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AA seq
896 aa
AA seq
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MSLTSSLTKPLAPSWANRFKEQSLERGRRYALENRVRIVECGDSTIVASCEGSGGNVYRQ
TISLRESAKGTLILVDSRCTCPVHTNCKHIAAVLLKVQETLAYPAAAQDAELLEKLQAVL
ENRAVLPQVVMEDVVPVPRLWMASVEFSAFEPRNGKMQRYIQHRAALSFNYLGNYVSGQK
NADIIVRQDTQSLRIKRHPELEQPYREQLRLLGFKIATRQSKALPESAGELFEMVNDSAW
LTFTLNATPTLRAEGWELLIDDDFGFDLSAVDDWYATVDEGPERDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPEKLARRRDDELILVNIPGLPNGHGPIQVALPYGRLKPVLAT
LGEFYLQEAGTTTLRLAKADAIRLNPLEDLPLQWEGGEKIRNFAQRLRDIKDFTCVAPEG
LNATLRPYQLEGLSWMQSLRQLDVGGILADDMGLGKTLQTLAHILTEKIAGRLDRPCMVV
MPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFANLPDYDLLLTTYALLPKDIEQLAAL
PLHVLILDEAQYIKNPSSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLG
DVKSFNRDYRVPIEKRASDVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVDLNEA
QRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGSS
SGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEVELKKRGVAYALLTGQTRDRRTPVK
DFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFVY
KMIARGTVEEKIQHLQKEKSDLAAGVLDGRTTGDWQLGNEDIEALFAPLPSKQEKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacgtcgtcgctgaccaaacccctggccccttcctgggccaatcgctttaaa
gagcagagccttgagcgcgggcgacgttatgcgctggaaaaccgggtgcgcatcgtcgaa
tgcggcgacagcactatcgtcgccagttgcgaaggctccggcggcaacgtgtatcggcag
accatctcgttgcgcgaatcagccaagggcaccttgatcctggtggacagccgctgtacc
tgcccggtgcacaccaactgcaaacacatcgccgcggtattgctcaaggtccaggaaacc
ctggcctaccccgccgccgcacaggatgccgagctgctggaaaaactccaggccgtgctg
gaaaaccgtgcggtgctgccgcaagtggtgatggaagacgtggtgccggtgccgcgtctg
tggatggccagcgtcgaattcagcgcctttgaaccgcgcaacggcaagatgcagcgctat
atccagcaccgggcagcgctgtcgttcaactacttgggcaactacgtcagcgggcagaaa
aacgccgacatcatcgtgcgccaggacacccaaagcctgcgcatcaagcggcatccggag
cttgagcaaccgtatcgcgaacaactgcgcctgctgggcttcaagatcgccacgcgccag
agcaaggcactgccggaaagcgccggcgagctgttcgagatggtcaatgacagtgcctgg
ctgaccttcaccctcaatgccacaccgacactgcgagccgagggttgggagctgctgatc
gatgatgatttcggcttcgacctcagcgcggtcgatgactggtacgccacggttgacgaa
ggtccggagcgtgattggttcgatctggagctggggatcatcgtcaacggcgagcgactg
agcctgttgccgatcctgctgaacctgatgcgttcccacaccgagatcctcaacccggag
aagctggcgcgacgccgtgatgatgagctgattctggtgaacatcccaggcctgcccaat
ggtcacggcccgatacaagtggcgctgccctacggtcgattgaaaccggtgctggcgacc
ctcggtgagttttacctacaggaagccggcaccaccacgttgcgcttggccaaggccgat
gcgatccggcttaacccgctggaagatctaccgctgcagtgggaaggtggcgaaaagatc
cgcaactttgcccagcgcctgcgggatatcaaggacttcacgtgtgtagcgcctgaaggg
ctgaacgcgaccttgcgcccttaccagttggaaggcttgagctggatgcagtcgctgcgt
cagctggatgtcggcggcatacttgcagatgacatgggcctgggcaaaaccctacagacc
ctggcgcatattctcactgagaaaatcgccggtcgcctggatcggccgtgcatggtggtg
atgcccaccagcctgatccccaactggctggatgaggcggcgcatttcacaccgcaactc
aaggtgctggcgctgtatggcgcagggcgcaagaaacatttcgccaacctgccggactat
gacctgctgctgaccacctatgcgctgctgcccaaggacatcgaacaactcgccgccctg
cccttgcatgtactgatcctcgacgaagcccaatacatcaagaacccgtccagcaaggcg
gcccaggcggcgcgcgagctgaatgctcgccagcgcctgtgcctgagcggcacgccgctg
gaaaaccacctgggcgagctgtggtcattgtttcacttcctgctgcctggctggctcggt
gatgtaaaaagcttcaaccgcgattaccgtgtgcccatcgaaaagcgtgccagtgatgtg
cgattgcaacacctcaacggccggataaaacctttcctgctgcgccgcaccaaggaacag
gtggcgactgagttgccacccaagaccgagattatccactgggtcgacctcaatgaagcc
cagcgcgacgtgtacgaaaccatgcgcctggccatggacaagaaagtccgcgacgagatc
acacgcaaaggcgtggcgcgcagccagatcatcatactggaggcgctgctgaagttacgc
caagtgtgttgcgatttgcggctggtcaacgacgcgaccctgcccgcccgtggcagcagc
tcaggcaaactcgatagcttgatggaaatgcttgaggagctgtttgaggagggtcggcgg
atcctgctgttttcccaattcacttcgatgttgagcctgatcgaagtcgagctgaaaaaa
cgcggcgtggcctacgcactgctcaccgggcagacccgggatcggcgcacgccggtgaaa
gacttccaaagcggcaagctgcagatttttctgatcagcttgaaagccggaggcgtgggc
ctgaacctgaccgaggccgatacggtgatccactatgatccttggtggaacccggccacg
gagaaccaggccaccgaccgcgcctatcgcatcgggcaagagaagccggtattcgtctac
aagatgattgcccgaggcacggtggaagagaaaatccagcacctgcagaaggaaaaatcc
gacctggcagcgggcgtgctggatgggcgtaccaccggagactggcagttgggtaacgag
gatatcgaagcgctgtttgcgccgctgcccagcaaacaagagaagcgctga
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