Pseudomonas canadensis: V6L78_26245
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Entry
V6L78_26245 CDS
T10710
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00071
Fatty acid degradation
pcaa00280
Valine, leucine and isoleucine degradation
pcaa00310
Lysine degradation
pcaa00362
Benzoate degradation
pcaa00380
Tryptophan metabolism
pcaa00410
beta-Alanine metabolism
pcaa00640
Propanoate metabolism
pcaa00650
Butanoate metabolism
pcaa00907
Pinene, camphor and geraniol degradation
pcaa00930
Caprolactam degradation
pcaa01100
Metabolic pathways
pcaa01110
Biosynthesis of secondary metabolites
pcaa01120
Microbial metabolism in diverse environments
pcaa01200
Carbon metabolism
pcaa01212
Fatty acid metabolism
Module
pcaa_M00087
beta-Oxidation
pcaa_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
V6L78_26245 (fadB)
00650 Butanoate metabolism
V6L78_26245 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
V6L78_26245 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
V6L78_26245 (fadB)
00310 Lysine degradation
V6L78_26245 (fadB)
00380 Tryptophan metabolism
V6L78_26245 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
V6L78_26245 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
V6L78_26245 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
V6L78_26245 (fadB)
00930 Caprolactam degradation
V6L78_26245 (fadB)
Enzymes [BR:
pcaa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
V6L78_26245 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
V6L78_26245 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
V6L78_26245 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
V6L78_26245 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WWL83367
LinkDB
All DBs
Position
complement(5686832..5688979)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAINGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtttccagc
ggtaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgattttgaa
gacctcaacgtaccgaccgtcgccgcgatcaacggcatcgcgttgggcggtggcctggaa
atgtgcctggcggcagacttccgcgtcatgtcggccacggccaagatcggcctgcctgaa
gtcaaactgggcatctacccaggttttggcggtaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgccggtaaggaaaaccgtgctgaagacgcgctg
aaagtcggtgctgtcgacgctgtggttgccccggacaaactggccgaagccgcattgaac
ctgatcaagggcgccatcaacggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgaaaccgccaaaggtttc
gtggctggccaggccggcccgaactacccggcaccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagctctggaagtggaagcggctggcttcgtcaaa
ctggcgaaaacctccgcagcccagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggcatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggtatcgagcaaggcctggcagaagccgccaagctg
ctggtcggtcgtgtggacaaaggtcgcatgaccgctgcgaaaatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggccacgtcgacctggtggtcgaagcc
gttgtcgagaacccgaaggtcaagcaagccgtgctggccgaagtggaagcccaggttaaa
gacgacaccatcctggcgtccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaggtcatccgtggcgagaagtccagtgagctggcggttgccactaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagttggtcagcgccggcgtggac
ttcgtgcgcatcgacaaagtcatggaaaaattcggttggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgctcggcgatcgacgcgctctacgaggccaagcgc
ctgggtcagaagaacggcaagggtttctacgcctacgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaggtgtcggacgaagacatcatcaactggatgatgatcgccctgtgcctggaaaccgta
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattcgatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcggttaa
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