Pseudomonas canadensis: V6L78_29315
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Entry
V6L78_29315 CDS
T10710
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6L78_29315 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_29315 (lptF)
Transporters [BR:
pcaa02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
V6L78_29315 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
WWL83948
LinkDB
All DBs
Position
complement(6277427..6278545)
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AA seq
372 aa
AA seq
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MIVFRYLSREVLLTLSAVSAVLLVIIMSGRFVKYLAQAASGALDPGSLFLIMGFRLPGFL
QLILPLGLFLGILLAYGRLYLESEMTVLSATGMSQQRLLGMTMIPAAGVALIVAWLSLSL
APQGAMQFQLVLNKQDAMTEFDTLEPGRFQALNDGSRVTYTETLTDDRANLGGVFISEKR
LGQDKKDRGISVLVADSGRQEVRPDGSRYLILENGYRYDGSPGMADYRAIKYDTYGVMLA
RPDISDEVTDRDAIPTTELFGSKELRSIAELQWRISLPLLVFIVTLMAVPLSRVNPRQGR
FLKLLPAILLYMAYLTILISARGSLEKGKLSPTLGLWWVHGIFLVIGLGLLYWEPIRLKM
LSRRGQKELARG
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgtcttccgttatctgtcccgcgaagtcctgttgaccctgagtgccgtgagtgcg
gtattgctggtcatcatcatgagtggtcgtttcgtcaaatacctggcccaggctgcctcc
ggcgccctggatccgggctcgctgttcctgatcatgggctttcgtctgccgggcttcctg
cagctgatcctgccgctcggcctgttcctcgggatcctgctggcctacggccgcctttac
ctcgaaagcgaaatgaccgtgctctcggccaccggcatgagccaacagcgcctgttgggc
atgaccatgatcccggccgccggcgttgcgctgatcgtggcctggctgagcctgagcctg
gccccccagggcgccatgcagttccagttggtactgaataaacaagacgcgatgaccgag
ttcgacaccctcgaacccggccgcttccaggcgctcaatgacggttcacgggtgacctac
accgaaaccctgaccgacgaccgtgccaacctgggcggcgtgttcatctccgagaagcgt
ctgggccaagacaagaaggaccgtggcatttccgtgctggtggccgattccggtcgccag
gaagtgcgtcctgacggcagccgctacctgatcctggaaaatggctatcgctacgatggc
agcccgggcatggccgattaccgtgcgatcaagtacgacacctatggcgtgatgctggcc
cgtccggatatcagcgacgaagtcaccgaccgcgacgccatcccgaccaccgagctgttc
ggcagcaaggaactgcgctcgattgccgagctgcagtggcggatttccctgccgttgctg
gtgttcatcgtgaccttgatggcggtgccgctgtcgcgcgtcaacccgcgtcagggtcgc
ttcctcaagctgttgccggcgattctgctgtacatggcttacctcaccatcctgatttcc
gcccgtggctccctggagaaaggcaagctgtcgccgaccctcggcctgtggtgggtgcac
gggatcttcctggtgattggcctgggcctgctctattgggaaccgattcgtttgaaaatg
ttgagccgtcgtggccagaaggagttggctcgtggctaa
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