Pseudomonas canadensis: V6L78_30240
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Entry
V6L78_30240 CDS
T10710
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcaa03019
]
V6L78_30240 (rng)
03009 Ribosome biogenesis [BR:
pcaa03009
]
V6L78_30240 (rng)
Messenger RNA biogenesis [BR:
pcaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V6L78_30240 (rng)
Ribosome biogenesis [BR:
pcaa03009
]
Prokaryotic type
rRNA processing factors
V6L78_30240 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
WWL84126
LinkDB
All DBs
Position
complement(6467880..6469337)
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHASEISLREGPAVESISALVHEGQSLVVQVTKDPIGSKGARLTTQLSIPSRY
LVYMPRTAHVGISLKIEDEAERERLKKVVSDCVAAEGIKEAGGFILRTAAEGAGADEILM
DIRYLRRLWDQIGAQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRETFQRTTQ
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVVDPAEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTPETVCYEI
FREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEGFIGRTIRFQVETIYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagattctgatcaatatcacgccgatggaatcgcgcgtggcggtggtagag
aacggtgttctgcaagaagtgcacgttgagcgcacccagaagcgcgggatcgtcggcaat
atctacaaaggcaaggtggtgcgggttttgccggggatgcaggcggcattcgtcgacatc
ggcctggaccgtgctgcgtttatccatgcttcggaaatttccctgcgcgaagggccagcg
gtagaaagcatcagtgccctggtgcacgaagggcagagcctggtggtgcaagtcaccaag
gaccccatcggctccaaaggcgcgcgcctgaccactcaattatcgattccgtcgcgttac
ctggtgtacatgccgcgcactgcccatgtcggcatttctctgaagatcgaagacgaagcc
gagcgcgagcgtctgaaaaaggtggtcagcgactgcgtggcggccgaaggcatcaaggaa
gcggggggcttcatcctgcgcaccgccgccgaaggcgccggcgccgatgagatccttatg
gacatccgctacctgcggcgcctgtgggaccagatcggtgcccagatcaagaccatcggc
gcgcccagcgtgatctacgaagacctcggcctggccctgcgtacgctgcgcgacctggtc
agtccgaagattgagaaaattcgcatcgactcgcgggaaacattccaacgcaccacacaa
tttgttgccgagctgatgcctgaaattgccgaccgcctggaacactatcccggcgagcgg
ccgatcttcgacctgtatggcgttgaagacgaaatccagaaagccctggaacgcaaggtg
ccgctcaagtccgggggctacctggtggtggacccggcggaagccatgaccaccatcgac
gtcaataccggcgcgttcgtgggccatcgcaacctcgaagaaaccatcttcaagaccaac
ctcgaagcagccaccgcgattgcgcgccaactgcgcctgcgtaacctgggcggcatcatc
atcatcgacttcatcgacatggaagatgaagaacaccagcgccaggtgctgcgtaccctg
gagaaacagctggaacgcgatcacgccaagaccaacatcatcggcatcaccgagctgggc
ctggtgcaaatgacgcgcaagcgcacccgcgaaagcctggagcaagtgctgtgcgagccg
tgcagcagttgccagggccgcggtaaattgaagactccggaaaccgtttgctacgaaatt
ttccgcgaaatcctgcgagaagcgcgagcctaccaggccgaaggttacagggtgctcgcc
aaccagaaagtggtcgatcggctgctggacgaagaatccggtaacgttgccgagctggag
gggtttatcgggcgcacgatacgcttccaggtcgaaaccatatattcccaggaacaatac
gacgtggtgctgctctga
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