Pseudomonas canadensis: V6L78_30885
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Entry
V6L78_30885 CDS
T10710
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcaa Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_30885 (phrB)
Enzymes [BR:
pcaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
V6L78_30885 (phrB)
DNA repair and recombination proteins [BR:
pcaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
V6L78_30885 (phrB)
Prokaryotic type
V6L78_30885 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
WWL84244
LinkDB
All DBs
Position
6607464..6608909
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AA seq
481 aa
AA seq
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MHLIWLRTDLRLHDNTALAAASQRGPLAAVYLITPQQWLDHDDAPCKVDFWLRNLQDLSK
TLGALNIPLLIRTAATWDQAPDVLSRLCRELSVESVHVNEEYGIHESRRDAAVSKALEAD
GVTFHSYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYTRLHSALPRIVAAPKAQAPIKLN
SDPIPKTVEGFEPPSDSLRALWPAGEDEARRRLDAFADQQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQTNGGEFESGDMGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSEGIFIK
HWLPELAALNKKEVHNPEAVGGLFGVADYPRSIVDLKKSRERALAAFRSLPSRQAVGGEH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgatctggctgcgcaccgacctgcgcctacacgacaacaccgccctggccgcc
gcgagccagcggggcccgctggcggccgtgtacctgatcacgccgcagcaatggctggac
catgacgatgcgccgtgcaaagtggacttttggctgcgcaacttgcaagacctgagcaag
acactgggcgcgctgaacatccccctgctgattcgcacggcggccacctgggatcaggca
cccgacgtattgagcaggttgtgccgcgagctatcggtggagtcagtccacgtcaacgag
gaatacggcatccacgaaagtcgccgagacgcggccgtgtccaaggccttggaagctgat
ggcgtgaccttccacagctacctcgaccaactgttcttccagcccggcagcgtgttgacc
aagaccggcacgtatttccaggtgttcagccagttccgcaaggtctgctacacccgtctg
cacagcgccctgccgcgtatcgtcgcagcgccaaaggcccaggcaccgatcaagctgaac
agcgacccgatcccaaagacggtcgaaggtttcgaaccacccagcgatagcctgcgcgcc
ctctggccggccggtgaagacgaagcccggcgccgcctcgacgcctttgccgatcaacaa
atcagctactacaaggacgagcgcgacttccccgccaagcccggcaccagccagttgtcc
gcctaccttgcggcgggtgtggtttcgccgcgtcagtgcctgcatgccgcgctgcaaact
aatggcggcgagtttgaaagtggcgacatgggcgccatcacttggatcaacgagttgctc
tggcgtgagttctacaagcacatcctggtgggttacccacgggtttctcgtcaccgcgct
ttccgccccgaaaccgaagccgtggcctggcgcaatgcgcccaaggacctcgccgcctgg
caggaagcgcgcaccggcttgccaatcatcgacgcggccatgcgccaactgctggaaacc
ggctggatgcacaaccgcctgcgcatggtggtagcgatgtttctgaccaagaacctgctg
atcgactggcgcgaaggtgagcgtttcttcatgcgccacctgatcgatggcgacctcgcc
gccaataacggcggctggcagtggagctcatccaccggcaccgactcggcaccgtacttc
cggattttcagcccattgagccagtcggagaaattcgacagcgagggcattttcatcaag
cactggctgccggagttggccgcactgaataaaaaagaagtgcacaaccccgaagccgtc
ggcggcttgttcggcgtggccgactacccgcgttctattgtcgacctgaaaaagtcccgc
gaacgcgccctggccgccttccgcagcctgccttcgcgccaagctgtcggaggcgaacat
gagtga
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