Pseudomonas canadensis: V6L78_31125
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Entry
V6L78_31125 CDS
T10710
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00470
D-Amino acid metabolism
pcaa00550
Peptidoglycan biosynthesis
pcaa01100
Metabolic pathways
pcaa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6L78_31125 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6L78_31125 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
V6L78_31125 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcaa01011
]
V6L78_31125 (ddlA)
Enzymes [BR:
pcaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
V6L78_31125 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pcaa01011
]
Precursor biosynthesis
Amino acid ligase
V6L78_31125 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
WWL84290
LinkDB
All DBs
Position
complement(6648562..6649656)
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AA seq
364 aa
AA seq
DB search
MSKVRVGIIFGGRSAEHEVSLQSARNIVDALDRSRFEPVLIGIDKAGHWHLNDTSNFLLN
QENPSLIALNQSNRELAVVPGKANQQLVETSGTGLLEHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGIAVTPFITLTRSNAARTSFEAAVNKLGL
PMFVKPANQGSSVGVSKVGDKVEYHAAVELALGFDEKVLVESAVKGREIECAVLGNENPI
ASGCGEIVVSSGFYSYDSKYIDDQAAQVVVPADISQEASERIRRLAIEAFEVLGCSGLAR
VDVFLTDDGEVLINEINSLPGFTRISMYPKLWQAAGMSYSELVSRLIELALERHAGRKGL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggtgcgggtaggtattatttttggtggcaggtcggccgagcacgaagtctcg
ttgcaatcggcgcgtaacattgttgacgcgctggaccgctcccgtttcgagccggtgttg
atcggtatcgacaaggctggccactggcacctcaacgacacatcgaacttcctgctcaac
caggaaaacccgtccctgatcgccctcaaccagtccaaccgcgaactggcggtggtgccc
ggcaaggccaaccagcaactggtggagacctcgggcacgggcttgctggaacatgtcgat
gtgattttccccatcgtccacggcaccctcggcgaagacggttgcctgcaaggtctgttg
cgcatggcggacctgccttttgtcggttccgacgtgctcggctcggcggtgtgcatggac
aaggacatcagcaaacgcctgctgcgcgatgcgggtatcgccgttaccccgttcatcacc
ctgacccgcagcaacgcggcgcgtacttcgtttgaggctgcggtgaacaaactcggcctg
ccgatgttcgtcaaacctgccaaccaaggttcctccgtgggcgtgagtaaagtcggcgac
aaagtcgaataccacgcggctgttgaattggccctgggttttgatgaaaaggtgttggtt
gagtccgccgtaaaaggccgtgaaatcgagtgtgccgtgctcggcaacgaaaaccccatc
gccagtggttgtggcgaaatcgtggtgagcagcggtttctactcctacgacagcaaatac
atcgacgaccaggccgcccaggtggtggtgccggccgacatcagccaggaagccagcgag
cgtattcgcaggctggccatcgaggcgttcgaggtgctgggttgttccggtttggcacgg
gtcgacgtgttcctcaccgacgacggtgaagtactgatcaacgaaatcaactcactgccc
ggcttcacccgcatcagcatgtaccccaagctgtggcaggcggcggggatgagctacagc
gaactggtgagccggctgatcgagctggcgttggagcggcacgcggggcgcaaggggttg
aagatcagtcggtga
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