Pseudomonas cannabina pv. alisalensis: JGS08_00340
Help
Entry
JGS08_00340 CDS
T07379
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_00340
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JGS08_00340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_AsnC-type
HTH_24
NirdL-like_HTH
HTH_20
HTH_Crp_2
HTH_11
MarR
HTH_IclR
MarR_2
HTH_47
HTH_CodY
HTH_Tnp_ISL3
TrmB
HTH_27
Motif
Other DBs
NCBI-ProteinID:
QQN22223
LinkDB
All DBs
Position
complement(66694..67164)
Genome browser
AA seq
156 aa
AA seq
DB search
MDKFDRAILDILQTDCTRPVADIAERIGLGSTACWRRIQKLEEAGIIDRRVALLNPQRLN
VSVSVFAAIRTNQHNAAWLEQFHAAVGDLPEVVECYRMAGDTDYMLRIVVADIAGYDAVY
KQLISIPGISDVSSSFAMEQIKFTTGLPLQYASFGG
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattcgaccgggcaattctcgacatcctgcaaaccgactgcacccgccccgtc
gcagacatcgccgagcgcatcggcctgggcagcaccgcatgctggcgccgcatccagaaa
ctggaagaggccggcatcatcgaccgccgcgtcgcattgctcaatccgcaacggctgaac
gtatccgtcagcgtcttcgccgccatccgcaccaaccagcacaacgcagcctggctcgaa
cagttccacgccgccgtcggcgacctgcccgaagtggtcgagtgctaccgcatggcaggc
gacaccgactacatgctgcgcatcgtcgtggccgacatcgcaggttacgacgccgtctat
aaacagctgatcagcatccccggcatcagcgacgtgagctcaagctttgccatggaacaa
atcaaattcaccaccggcctgcccttgcaatacgcatcgtttggcggataa
DBGET
integrated database retrieval system
