Pseudomonas cannabina pv. alisalensis: JGS08_00650
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Entry
JGS08_00650 CDS
T07379
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JGS08_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QQN22278
LinkDB
All DBs
Position
complement(141035..143356)
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AA seq
773 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRY
LRELDDRRVSILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPGLNPETEAARFVDAEKGVADVKAALEGAKYILMERFAEDAALLDKLRS
FLKQEAVISARVVPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG
EELPGAMHPCELMIGERFGIQNQSRPADKWLAEVVRWTWKVKLYSHLETDLLGELRESAE
TEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKN
QWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPGLKMTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRASLKKVSRL
GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDP
KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSSQRQQSSAPRKETSAPAPANNAMASLFANAKQLKKR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaagaactcggcgtacgcccacaacaggtcgcc
gcggccgtcgcactactggatgaaggctcgaccgtgcccttcatttcccgttatcgcaag
gaagtgaccggcagcctcgatgacacgcaattgcgccatctggaagaacgcctgcgctac
ctgcgcgaactggacgaccggcgcgtcagcatccttgccagcatcgaagagcaaggcaag
ctgaccccggaactcgctcgcgatatcaagctggccgacaccaagacccgccttgaagat
ttgtacctgccctacaagcaaaaacgccgcaccaaggggcagatcgcccttgaagcaggc
ctcggcgaactggccgatggcctgttcaacgacccgggcctgaatccggaaaccgaagct
gcacgcttcgtcgacgctgaaaaaggcgtggccgacgtgaaggccgcgctggaaggtgcc
aagtacattctgatggagcgctttgccgaagacgctgccctgctcgacaaactgcgcagt
ttcctcaaacaggaagcggtgatcagtgcgcgtgtggtgccgggcaaagaagaggaaggc
gccaagttccgcgactatttcgaacacgacgagccgctcaagagcatgccgtcgcaccgc
gccctggcgattttccgcggtcgcaatgaaggcttcctcagcagcgcgctgaaagtcggc
gaagaactgccgggcgccatgcacccgtgcgagctgatgatcggcgagcgcttcggcatt
cagaaccagagccgccctgccgacaagtggctggctgaagtggtgcgctggacctggaag
gtcaagctgtacagccatctggaaaccgatctgctcggcgagctgcgcgagagcgcggaa
accgaagcgatcaacgtgttcgcccacaacctgcacgacctgctgctcgccgccccggcc
ggccagcgcgcgacactgggcctcgacccgggcttgcgcaccggctgcaaggtcgccgtg
gtagacgccaccggcaaactgctcgactacgcgacggtctatccgcatgtgccgaaaaac
cagtgggaccagaccatcgccgtgctggctgcgctgtgcgccaagcactcggtcgacctg
atcgccatcggcaacggcaccgccagccgtgaaaccgacaagctggccgccgacctgatc
aaaaaatacccaggcctgaaaatgaccaaggtcatggtgtcggaagccggcgcatcggtt
tactcggcctcggaactggcggccaaggaattccccgatctggacgtatcgatccgtggc
gcggtgtcgattgcccggcgcttgcaggacccgctggccgagctggtgaaaatcgacccg
aaatccattggtgtcggtcagtaccagcatgacgtttcgcaactgaaactggctcgtggt
ctggacgcagtggttgaagactgtgtgaacgccgtgggcgtggacgtgaacaccgcgtcg
gtggcgctgctggcgcggatttccggcctcaacaccacactggcgcagaacatcgttgcg
catcgcgatgaaaacggtgccttcaaaacccgcgcttcgttgaagaaagtcagtcgtctg
ggcgaaaaaaccttcgaacaggccgcaggctttctacgcgtgatgaacggtgacaacccg
ctggactcgtcggccgttcacccggaagcttacccgctggtgcagcggattgcggcggag
accgaccgcgacatccgttcgctgatcggcgatgccagctttctcaagcgtctggacccg
aagaagttcaccgacgagaccttcggtctgccgaccgtgaccgacattctgcaagaactg
gaaaaaccgggccgagacccgcgtccggagttcaagaccgccgagttccaggacggcgtc
gaagacctcaaggacctgcaactgggcatgatcctcgaaggcgtcgtcaccaacgtcacc
aacttcggtgcgttcgtcgatatcggcgtgcatcaggacggcctggtgcatatctccgcg
ctgtccgagaagttcatcaaggacccgcgtgaagcggtcaaggccggcgacgtggtgaaa
gtgaaggtcatggaagtcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacgcccggcgagaagatcgacggcgcccgtggcgctcgccccggctcttcacagcgc
cagcagagcagcgcaccgcgcaaggaaacgtctgcaccggcaccggccaacaacgccatg
gcctcgctgttcgccaacgccaagcaattgaagaagcgttga
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