Pseudomonas cannabina pv. alisalensis: JGS08_00730
Help
Entry
JGS08_00730 CDS
T07379
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03030
DNA replication
pcab03410
Base excision repair
pcab03420
Nucleotide excision repair
pcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JGS08_00730 (polA)
03410 Base excision repair
JGS08_00730 (polA)
03420 Nucleotide excision repair
JGS08_00730 (polA)
03440 Homologous recombination
JGS08_00730 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcab03032
]
JGS08_00730 (polA)
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_00730 (polA)
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JGS08_00730 (polA)
DNA replication proteins [BR:
pcab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JGS08_00730 (polA)
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JGS08_00730 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JGS08_00730 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QQN22294
LinkDB
All DBs
Position
complement(157972..160737)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPESPLAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYDNLDKVATLPIRGAKTLAAKLEEHREM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDALMELYAELEFKSWIEDLQRDAKRAGQEL
TVEEPTVEAKEAAYEVILEQTQFDAWLKKLQATPLFAFVTQSNGTDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDSVLKTLKPLLEDPGKIKVGQHAKFAINLLANCAIDGD
QAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQDIAGKGAKQLTFDQ
IAIEQAGNYAAEEADLTLRLHEVFEARLAAIPTLQPVLNDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQPS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHAF
RNDLDVHRATAAEVFGVELEGVTQDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLDYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLDASGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGIGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcctggtggacggttcttcttacctctaccgcgccttccat
gcactgccccctctgaccacgtccaaaggcttgccgaccggcgccgtcaaaggcgtgctg
aacatgctcaaaagcctgcgtcgccagtacccggaaagcccgctcgccgtggttttcgat
gccaagggcgggacctttcgtgacgcgctgtacaccgactataaagccaaccggcccagc
atgccggatgacctgcgcgtgcaggtcgatctgctgcatgcgtgcgtcaaaggcatgggc
tatccgtttttgtgcgtggaaggcgtcgaagcggatgacgtgatcggcaccctggcgcgc
agcagcgcagcggcagatcgtccggtggtcatttccaccggcgacaaagacatggcgcaa
ctggtcgacgggcatatcacgctggtcaataccatgaccggcagcgtgctggacgttgca
ggcgtgaaagagaaattcggcgtcggtccggagcacattatcgattacctcgcgctgatg
ggcgacaaggtcgacaacattccaggcgtgccgggggtcggtgaaaaaaccgcggtcggc
ctgctggttggcgtcggtggcgggatcaaagagctttacgacaacctcgacaaggtcgcg
accctgccgatccgcggtgccaagaccctcgccgccaagctcgaagagcatcgcgagatg
gcgtttctgtcctacgagctggcgaccatcaagatcgacgtgccactggacatcgaactg
gatcagctgcactgcggcgagccggaccgcgatgcgctgatggagctgtacgccgagctg
gaattcaaaagctggatcgaagacctgcaacgcgatgccaagcgtgccgggcaggaattg
accgttgaagagccgacagtcgaagccaaagaagcggcctatgaagtcatccttgagcag
actcagttcgacgcctggctgaaaaagcttcaggccacgccgctgttcgccttcgtcact
cagagcaacggcaccgacgcccaacgcgcgcaactggtcggcttgtcttttgccattcag
acccacgaagcggcgtacattccgctgactcactcgtacatgggcgtcccgcagcagctg
gatcgggacagcgtgctcaagaccctcaagccgttgctggaggacccgggcaagatcaag
gtcggtcagcacgccaaattcgccatcaatctgctcgccaattgcgcgatcgatggcgat
caggcgcaaggcatcgatttgcagggcgtccgcttcgacaccattctggaatcctacgta
ctggattccacggcgacccgtcacgaccgcgacagcctggtggccaagtacctgacgcac
acgccgatcaactttcaggacatcgccggcaagggtgccaaacagctgaccttcgatcag
atcgccatcgagcaggcgggtaactacgccgccgaagaagcggacctgaccctgcgtctg
catgaagtgttcgaagcgcgtctggcggcgatcccgaccttgcagccggtactcaacgat
atcgagatgccacttgtccccgtgctggcgcgtatcgagcgccagggcgcgctggtcgat
gccaacctgctgggcattcagagcgtcgaactgggcgacaagatgaccgcattggaacgc
gaagccttcgccattgccggtgaagagttcaacctgggctcgcccaagcagctcggggtg
attctctacgagaagctcggcatgccgatcctcagcaaaaccgccaccggccagccgtcg
accgccgaggcggtgcttgccgaactggccgagcaggacttcccgctgccgaaggtgctg
atgcagtaccgttcgatgagcaagctgaaaagcacctacaccgaccgcctgcccgaacag
atcaacccgcgcaccgggcgcattcacacgtcctatcatcaggccgtggcggtgaccggg
cgcttgtcgtccagcgatccgaacctgcagaacatcccgattcgtaccgccgaagggcgc
cgtattcgtcaggcgttcgtggcgccgaagggttacaaactgctggcggcggactattcg
cagatcgaactgcggatcatggcgcatctggcgaaggacgaaggcttgctgcacgcgttc
cgcaatgatctggacgtacaccgggccacggcggcggaagtcttcggcgtcgaactggaa
ggcgtgactcaagacatgcgccgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcgttcggtctggccaagcagatcggcgtcgaccgcaagcagtcacaggcttac
gtagaccgttacttcgcccgctaccccggcgtgctcgactacatggagcgcactcgcgcc
caggccgccgagcagggttttgtagaaaccatcttcggccgtcgcctgtacctgccggac
atcaatgccaagaacccgtccctgcgcaagggcgcggagcgcatggcgatcaacgcgccg
atgcaaggtacggccgcagatatcatcaagaaagcgatggtggcggtaaatggctggctg
gatgcgtccggcctggatgcacgcgtcatccttcaggtgcacgatgaactggtgctggaa
gtgcgcgaagacctggtcgatcagatcagcgaacagatccgtccgcacatgagcggagcc
gcagaattggccgtgccgctgctggtggaagtcggcatcggcaacaattgggacgaggca
cattga
DBGET
integrated database retrieval system
