Pseudomonas cannabina pv. alisalensis: JGS08_01140
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Entry
JGS08_01140 CDS
T07379
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcab03021
]
JGS08_01140 (rpoH)
Transcription machinery [BR:
pcab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JGS08_01140 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
QQN22369
LinkDB
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Position
241824..242678
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVQTVNSIPLLTPERERELAESLYYEQDLDAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDSDWTDNSTANLHQALDVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKTSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcttatgctttagtcccgggtgcaaaccttgaggcctat
gtgcaaacggtcaacagcattccattgctgacgcccgagcgggagcgtgaactggctgag
agtctctactatgagcaggatctggacgcggcccgacaaatggtcctcgcccacctgcgc
tttgttgtgcacatcgctcgcagttattcgggttacggtctggcgcaggccgacctgatc
caggaaggcaatgtcggcctgatgaaggccgtgaagcgcttcaatccggaaatgggcgtg
cgtctggtgtcgtttgccgtgcactggatcaaagccgagattcacgagttcatcctgcgc
aactggcgcatcgtcaaggttgccacgaccaaagcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgacgaagtacatcgcgtcgccgaa
agcctgggcgtcgagccgcgtgaagtccgtgaaatggaaagccgcctgactggccatgac
atggccttcgacccggcagccgaagcggatgacgacagcgcgttccagtcgccagccaat
tatctggaagaccaccgctacgacccggcgcgtcaactggaagactcggactggaccgac
aactccaccgccaacctgcatcaggcgctggacgtactcgacgaacgcagccgcgatatt
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacttggcgcagaagtac
aacgtctctgccgagcgtattcgtcagctggaaaaaagcgcgatgaacaagctcaagacg
tcgattgctgcgtaa
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