Pseudomonas cannabina pv. alisalensis: JGS08_01490
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Entry
JGS08_01490 CDS
T07379
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_01490
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JGS08_01490
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QQN22436
LinkDB
All DBs
Position
complement(322938..323864)
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AA seq
308 aa
AA seq
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MQIDDELTLKKLEIFLAFMRTGNLARAAEALQTSNVSVHRAIHSLESALRCPLFKHEGRN
LTPLESAYVLEERAQKLVLDVLATVELTRQAAGFSAARFRLGALYSLTVKTVPQLIMGLK
IRRSELNIDLILGSNIDLLYKLKNMEVDAMLVALDESTNDPDCEHLALFSDDIFLAVPTD
SPFAERHEVDLSDLREATFITLTQGFATHRDGIRVFQQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVRLIPLQSRYRMQQHIGMVFLKSKERDPNLLALVAECRMYA
NRLLEQAI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgatgacgaactcaccctgaagaaactggaaatattcctcgcgttcatgcgc
accggcaatctggcccgtgcggcggaggcgttgcagaccagcaacgtcagcgtccaccgt
gccattcattccctggaaagcgccctgcgctgcccgctgttcaagcacgaagggcgcaac
ctgacgccgctggaaagcgcttatgtgctggaagaacgcgcgcagaaactggtgctggat
gtgctcgccaccgtggaactgacccgtcaggcggcgggcttttcggcggcgcgattccgg
ctcggggccttgtattcgctgacggtcaagaccgtaccgcagttgatcatgggtttgaag
atccgccgcagcgaactgaatatcgacctgattctgggctcgaacatcgacctgctctac
aagctcaagaacatggaagtcgacgccatgctggtggcgctggacgagagcaccaatgac
ccggattgcgagcatctggcgctgttttccgatgacatctttctcgccgtccctaccgat
tcgcccttcgccgaacgccacgaagtcgacctgagcgacctgcgtgaagcgacgttcatc
accctgacccagggcttcgccacccaccgcgacggcatacgggtttttcagcaggccggg
ttcgagcccaaggtggcgatgcaggtcaatgacatcttcaccctgctgagcatggtcagc
tcaggcgtcggctatgcgctgctgccggggcgtatcgcagcggtctatgaaaaccgcgtg
cgcctgatcccgttgcaaagccgctaccgcatgcagcaacacatcggcatggtctttctc
aagtccaaagagcgcgatcccaacctgctggcgctggtggccgaatgccggatgtatgcg
aatcgcctgttggagcaggcgatctga
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