KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_01580
Entry
JGS08_01580       CDS       T07379                                 
Symbol
choV
Name
(GenBank) choline ABC transporter ATP-binding protein
  KO
K02000  glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    JGS08_01580 (choV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcab02000]
    JGS08_01580 (choV)
Enzymes [BR:pcab01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.9  ABC-type quaternary amine transporter
     JGS08_01580 (choV)
Transporters [BR:pcab02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Glycine betaine/proline transporter
    JGS08_01580 (choV)
SSDB
Motif
Pfam: ABC_tran AAA_21 ABC_ATPase RsgA_GTPase nSTAND1 AAA_16 AAA_29 SMC_N AAA_22 Cuticle_1 PEPCK_ATP
Other DBs
NCBI-ProteinID: QQN22453
LinkDB
Position
complement(344632..345810)
AA seq 392 aa
MSIIKFDKVDVIFSKDPREALKLLDEGLTRDQILKKTGQIVGVESASLDIEKGEICVLMG
LSGSGKSSLLRCINGLNTVSRGSLFVEHEGSQINIANCSAAELKMMRTKRIAMVFQKFAL
MPWLTVRENISFGLEMQGRPEKERRKLVDEKLELVGLTQWRNKKPDELSGGMQQRVGLAR
ALAMDADILLMDEPFSALDPLIRQGLQDELLALQTKLSKTIVFVSHDLDEALKLGSRIAI
MKDGRIVQYSVPEQIVLNPADEYVRTFVAHTNPLNVLCGRSLMRPVDDCTKVNGSVCLDP
SGDSWLDLAEGNVIKGARQGTGALDLQNWTPGQDVNSLDRRPTLVHSNIGMRDALQIRYQ
TGNKLVLQDGNQVVGILGDTELYHALLGKNHG
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgagcatcatcaaattcgacaaggtagacgtcatcttctccaaggacccgcgtgaagcc
ctcaagctgctggatgaaggccttacgcgtgaccagattctcaagaaaaccggccagatc
gttggcgtcgagagcgccagtctggacatcgaaaaaggcgaaatctgcgtattgatgggc
ctctcgggctcgggcaaatccagcctgctgcgctgcatcaacggcctcaacacagtaagc
cgtgggtcattgttcgttgaacatgaaggctcgcagatcaatatcgccaattgcagcgcc
gccgagctgaaaatgatgcgcaccaagcgcatcgcgatggtgttccagaagttcgccctg
atgccctggctgacggtgcgcgaaaacatcagcttcggcctggagatgcagggtcgaccg
gaaaaggaacggcgcaagctggtggatgaaaaactcgaactggtcggcctcacccagtgg
cgcaacaagaagccggacgagctttccggtggcatgcagcagcgcgtaggcctggcccgt
gcgctggcgatggacgctgacatcctgctgatggacgaaccgttctcggcactcgacccg
ttgatccgccagggtttgcaggacgaactgctcgccctgcaaaccaagctgagcaaaacc
atcgtgttcgtcagccacgacctggatgaggcactgaaactcggcagccgcatcgcgatc
atgaaagacggccgcatcgttcagtacagcgtgccggaacagatcgtcctcaacccggcc
gacgagtatgtgcggaccttcgtggcgcacaccaatccgttgaacgtgctctgtggtcgc
agcctgatgcgtcccgtcgatgactgcaccaaggtcaacggctcggtgtgcctggacccg
agcggcgactcttggctcgatctggcagaaggcaacgtgatcaaaggcgcacgccagggc
accggcgcgctcgacctgcaaaactggacccccggccaggacgtcaacagcctcgaccgc
cgcccgacactggtgcactccaacatcggcatgcgcgacgccttgcagatccgctaccag
accggcaacaaactggtgttgcaggacggtaaccaggtggtcggtattctgggcgatacc
gagctgtaccacgcactgctgggtaaaaatcatggctga

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