Pseudomonas cannabina pv. alisalensis: JGS08_01585
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Entry
JGS08_01585 CDS
T07379
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_01585 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_01585 (choW)
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
JGS08_01585 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Trp_oprn_chp
DUF3464
PsbK
Motif
Other DBs
NCBI-ProteinID:
QQN22454
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All DBs
Position
complement(345807..346652)
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AA seq
281 aa
AA seq
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MLTDQKIPLGEYIAAFVDWLTANGADYFDAIASTLEMMIHGFTFALTWFNPLVLIGLIAA
LAHFIQRKWGLTVFVILSFLLILNLHYWQETMETLAQVLFATLVCVVIGVPLGIIAAHKP
MFYTIIRPILDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
QELLDAGKAFGSSRRQLLTRIELPYAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPEAKKGSDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgatcaaaaaatccctctgggcgagtacatcgccgcattcgtcgactggttg
acggccaacggcgccgactacttcgatgcgatagcctcgacactggaaatgatgatccac
gggttcacctttgcgctgacctggttcaacccgttggtattgatcggcctgattgccgca
ctcgcgcacttcattcagcgcaagtggggcctgacggttttcgtcatcctttcatttctg
cttattctcaacctgcattactggcaggaaaccatggaaaccctggcgcaggtgctcttc
gccaccctggtctgcgtcgtcatcggcgtgccactgggcatcattgccgcacacaaaccg
atgttctacaccatcatccggccgatactggacctgatgcagaccgtgcccaccttcgtc
tatctgattccgaccctcaccctgttcggcctcggcgtggtgcccggcctgatctcgaca
gtggtcttcgccattgccgcaccgatacgcctgacgtatctgggcattcgcgatgtgcct
caagagctgcttgacgccggcaaggcctttggctcgtcgcgccgccagttgctgacccgc
atcgaactgccctacgccatgcccagcatcgcggccggcattacccagtgcatcatgctg
tcgttgtcgatggtagtgatcgcggcactggtcggtgcggacggcctcggtaaaccggtc
gtcaatgccctgaacaccgccgacatcgccctcggtttcgaagcaggtctggcaatcgta
ttgctggcaatcatgctcgaccgcatctgcaaacaacccgaagccaagaaagggtctgac
gcatga
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