Pseudomonas cannabina pv. alisalensis: JGS08_01995
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Entry
JGS08_01995 CDS
T07379
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_01995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_01995
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JGS08_01995
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Ortholog
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GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QQN22527
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Position
443037..444284
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AA seq
415 aa
AA seq
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MAIAVPLTEGASPNLKQRLARAERVNRWKAQALIAPLVIFLLLVFLVPIAALLYKSVGNP
EVVTALPTTVVEVQKWDGKGLPPESVYKAMSLDLAETRKNSTLGDLSKRLNIELAGYRSL
LSKTARALPFKTEPASYKEALEALDERWGDPAYWQAVRRNTSSVTPYYLLAAVDHRIDDL
GEVAPATPDQAIYLDIFARTFWMGLVITAICLVLAYPLAYLLANLPARQSNLLMILVLLP
FWTSILVRVAAWIVLLQSSGLINSALLAMGIIDKPLELVFNRVGVYISMVHIMLPFMILP
IYSVMKNISPTYMRAAISLGCHPFASFWRVYFPQTYAGIGAGCLLVFILSIGYYITPALL
GSPNDQMVSYFVAFYTNTSINWGMATALGGLLLLATIVLYLIYSWLVGASRLRLS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgccgtgcccttgactgaaggcgccagccccaacttgaagcaacgcctcgct
cgcgccgagcgggtcaaccgctggaaggctcaggcactgatcgcgccgttggtgattttc
ctgttgttggtgtttctggtgcctatcgccgcgctgctctacaaaagcgtcggcaacccc
gaagtcgtgactgcgctgccaaccaccgtggtcgaagtgcagaaatgggacggtaaagga
ctgccgcccgagtcggtctacaaggcgatgagcctggacctggccgaaacacgcaagaat
tccacgctgggcgatctgtccaagcgtcttaacatcgagctggccggctatcgcagcctg
ctgagcaaaaccgcccgcgcgctgccgttcaagactgagccggcctcttataaagaagcg
ctcgaggcactggacgaacgttggggcgaccctgcctactggcaggcggtacgtcgtaat
accagcagtgtgacgccgtattacctgctggccgccgttgaccatcgcatcgatgatctc
ggtgaagtggccccggccacgccggatcaggctatctatctggatatcttcgcccgcacc
ttctggatgggcctggtgatcaccgcgatctgcctggtgctggcgtatccgctggcctac
ctgctggccaacttgccggcacggcagagcaacctgctgatgattctggtgctgctgccg
ttctggacttcaatcctggtccgcgtcgcggcctggatcgtgctgttgcagtcgagcggg
ctgatcaacagcgcgctgctggcgatgggcatcatcgacaaaccgctggaactggtcttc
aaccgggtcggggtgtacatctcgatggtgcacatcatgctgccgttcatgatcctgccg
atctacagcgtgatgaagaacatctcccccacctacatgcgcgccgccatttcgctgggc
tgccacccgttcgccagcttctggcgtgtgtacttcccgcagacctacgcaggcatcggg
gcgggttgtctgctggtgttcattctgtcgatcggctactacatcaccccggccttgctg
ggcagcccgaacgaccagatggtcagctattttgtcgcgttctataccaacaccagcatc
aactggggtatggcaacggcgctcggcgggctgttgctgttggcgaccatcgtgctgtac
ctgatttatagctggctggtcggcgccagccgcctgcgactgagctga
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