KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_01995
Entry
JGS08_01995       CDS       T07379                                 
Name
(GenBank) ABC transporter permease
  KO
K02054  putative spermidine/putrescine transport system permease protein
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JGS08_01995
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcab02000]
    JGS08_01995
Transporters [BR:pcab02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    JGS08_01995
SSDB
Motif
Pfam: BPD_transp_1
Other DBs
NCBI-ProteinID: QQN22527
LinkDB
Position
443037..444284
AA seq 415 aa
MAIAVPLTEGASPNLKQRLARAERVNRWKAQALIAPLVIFLLLVFLVPIAALLYKSVGNP
EVVTALPTTVVEVQKWDGKGLPPESVYKAMSLDLAETRKNSTLGDLSKRLNIELAGYRSL
LSKTARALPFKTEPASYKEALEALDERWGDPAYWQAVRRNTSSVTPYYLLAAVDHRIDDL
GEVAPATPDQAIYLDIFARTFWMGLVITAICLVLAYPLAYLLANLPARQSNLLMILVLLP
FWTSILVRVAAWIVLLQSSGLINSALLAMGIIDKPLELVFNRVGVYISMVHIMLPFMILP
IYSVMKNISPTYMRAAISLGCHPFASFWRVYFPQTYAGIGAGCLLVFILSIGYYITPALL
GSPNDQMVSYFVAFYTNTSINWGMATALGGLLLLATIVLYLIYSWLVGASRLRLS
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggccatcgccgtgcccttgactgaaggcgccagccccaacttgaagcaacgcctcgct
cgcgccgagcgggtcaaccgctggaaggctcaggcactgatcgcgccgttggtgattttc
ctgttgttggtgtttctggtgcctatcgccgcgctgctctacaaaagcgtcggcaacccc
gaagtcgtgactgcgctgccaaccaccgtggtcgaagtgcagaaatgggacggtaaagga
ctgccgcccgagtcggtctacaaggcgatgagcctggacctggccgaaacacgcaagaat
tccacgctgggcgatctgtccaagcgtcttaacatcgagctggccggctatcgcagcctg
ctgagcaaaaccgcccgcgcgctgccgttcaagactgagccggcctcttataaagaagcg
ctcgaggcactggacgaacgttggggcgaccctgcctactggcaggcggtacgtcgtaat
accagcagtgtgacgccgtattacctgctggccgccgttgaccatcgcatcgatgatctc
ggtgaagtggccccggccacgccggatcaggctatctatctggatatcttcgcccgcacc
ttctggatgggcctggtgatcaccgcgatctgcctggtgctggcgtatccgctggcctac
ctgctggccaacttgccggcacggcagagcaacctgctgatgattctggtgctgctgccg
ttctggacttcaatcctggtccgcgtcgcggcctggatcgtgctgttgcagtcgagcggg
ctgatcaacagcgcgctgctggcgatgggcatcatcgacaaaccgctggaactggtcttc
aaccgggtcggggtgtacatctcgatggtgcacatcatgctgccgttcatgatcctgccg
atctacagcgtgatgaagaacatctcccccacctacatgcgcgccgccatttcgctgggc
tgccacccgttcgccagcttctggcgtgtgtacttcccgcagacctacgcaggcatcggg
gcgggttgtctgctggtgttcattctgtcgatcggctactacatcaccccggccttgctg
ggcagcccgaacgaccagatggtcagctattttgtcgcgttctataccaacaccagcatc
aactggggtatggcaacggcgctcggcgggctgttgctgttggcgaccatcgtgctgtac
ctgatttatagctggctggtcggcgccagccgcctgcgactgagctga

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