Pseudomonas cannabina pv. alisalensis: JGS08_02765
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Entry
JGS08_02765 CDS
T07379
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_02765 (miaB)
Enzymes [BR:
pcab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JGS08_02765 (miaB)
Transfer RNA biogenesis [BR:
pcab03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JGS08_02765 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
HTH_39
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QQN22666
LinkDB
All DBs
Position
complement(582666..583994)
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AA seq
442 aa
AA seq
DB search
MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPEMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARI
TRLPQVDVSFPEIEKFDHLPEPRVDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VLSEVIHLAENGVREVTLLGQNVNGYRGTTHDGRVADLADLIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTTLEYKSRLRKLRAAVPGI
SISSDFIVGFPGETEKDFDNTMKLIEDVGFDFSFSFIYSPRPGTPAADLQDDTPEALKKE
RLAALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCNNPKLI
GQFADVHIDDAQPHSLRGSLLQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgacctgctgggcgaacatcaggctctggaagtcaccgctcgcgcggaagac
gccgacgtgatcctgctcaacacctgttcgattcgcgaacgcgcccaggaccgggtgtat
tcgcagctcggccgctggcgtgagctgaaactggccaacccggagatggtgattgccgtc
ggcggctgtgttgccagccaggagggcgcggccatccgcgaccgcgcgccctatgtagat
gtggtattcggcccgcagaccctgcaccgcctgccggaaatgatcgacgcggcacgcatc
acccgcctgccgcaggtcgatgtttcattcccggaaatcgaaaaattcgaccacctgccc
gagccgcgcgtcgatggcccgagcgcttacgtgtcggtgatggaaggctgcagcaagtac
tgcacattctgcgtggtgccctacacccgcggcgaagaagtcagccgcccgttcgacgac
gtgctcagcgaggtcatccaccttgcagagaacggcgtgcgtgaagtcacgctgctcggg
cagaacgtcaacggctatcgcggcaccacccatgacgggcgggtcgcggacctggccgat
ttgatccgcgtcgttgccgcagtcgacggtatcgaccgcattcgttacaccacctcgcac
ccgctcgagttctccgacagcctgatccaggctcacgccgaagtgccggagctggtcaaa
cacctgcacttgccggtgcaatcgggctcggaccgcattctggcggcgatgaagcgcaac
cacaccacgctggaatacaagtccagactgcgcaagctgcgggcggcagtgccggggatc
agcatcagttccgatttcatcgtcggcttccccggcgagaccgaaaaagacttcgacaac
accatgaagctgatcgaggacgtgggtttcgatttctctttctcgttcatctacagcccg
cgccccggcacaccggccgccgatctgcaagacgacacgccggaagccctgaaaaaagag
cggctggccgccttgcagcatcgcctcaaccaacagggtttcgagatcagccgacagatg
gtcggcagcatccagcgcattctggtcaccgattactcgaaaaaagaccccggcgagctg
caaggccggaccgagaacaaccggatcgtcaatttccgctgcaataatccaaaactgatc
gggcaatttgccgacgtgcacatcgatgacgcgcagccgcactcattgcgtggctcgctg
ctacagtaa
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