KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_03405
Entry
JGS08_03405       CDS       T07379                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab03030  DNA replication
pcab03430  Mismatch repair
pcab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JGS08_03405
   03430 Mismatch repair
    JGS08_03405
   03440 Homologous recombination
    JGS08_03405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcab03032]
    JGS08_03405
   03400 DNA repair and recombination proteins [BR:pcab03400]
    JGS08_03405
Enzymes [BR:pcab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JGS08_03405
DNA replication proteins [BR:pcab03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JGS08_03405
DNA repair and recombination proteins [BR:pcab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JGS08_03405
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QQN24584
LinkDB
Position
751107..751718
AA seq 203 aa
MERIAVIDFETTGISPNHSCRATEIAVVIMEQGRIVERFQSLMNAGVRIPAFIEGLTGIS
NNMIRTAPSAERVMGDVADFVGATPLVAHNASFDQKFWDYELSRIQRKREQSFACSMLLA
RRLMPGAPNHKLGTLTSYARLPNTGKAHRAMADAEMAANLTAYLTNELRNTHGIAGISHQ
MLCSLQKVPAAKISETLKRQRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtattgcagtcatcgactttgaaaccaccggaatctctccgaaccacagctgc
cgggcgaccgagattgcggtggtgatcatggagcaggggcgtatcgtcgagcgctttcaa
agcttgatgaatgccggtgtacgaatcccggcgttcatcgaagggttgaccgggatcagc
aacaacatgattcgcaccgcgcccagtgccgagcgggtgatgggtgatgtggcggacttc
gtcggcgcgacgccgctggtggcgcacaatgcctcgttcgaccagaaattctgggattac
gaactctcccgtatccagcgcaaacgcgaacagagcttcgcctgttccatgctgctggcc
cgccgcctgatgcccggcgccccgaatcacaagctcggcacgctgaccagctatgcgcgc
ctgcccaacaccggcaaggctcaccgggccatggccgatgcggaaatggccgccaacctg
acggcgtacctgaccaacgaactgcgcaacacccacggtattgccggtatttcccaccag
atgctgtgctcgctgcagaaagtccccgccgccaaaatcagcgaaaccctcaagcgtcag
cgcggtttttga

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