Pseudomonas cannabina pv. alisalensis: JGS08_03530
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Entry
JGS08_03530 CDS
T07379
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_03530 (radA)
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JGS08_03530 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
DnaB_C
AAA_16
AAA_22
GvpD_P-loop
RecA_N
SLFN-g3_helicase
AAA
Rad51
nSTAND_NTPase5
AAA_24
nSTAND3
AAA_14
NTPase_1
MCM
ABC_tran
AAA_29
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QQN22782
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Position
777848..779215
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AA seq
455 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCADCGAWNTLVETMIESGAAAPPSGRTGWTGSQAQIR
TLAEVSVEEIPRFSTNSAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAQRMP
ALYVTGEESQQQVAMRARRLGLPQDKLRVMTETCIETIIATAKVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaaacgcttgtacggctgcaccgagtgcggcgcgacatttcccaagtgg
gcgggccagtgtgccgattgcggtgcctggaacacactggtcgaaaccatgattgaaagc
ggtgccgccgcgccgcccagcggacgtaccggctggaccggctcgcaggcacagatcaga
accctggcggaagtcagcgtcgaagagattccgcgtttttccaccaactccgccgaactg
gatcgcgtgctcggtggcggtctggtggacggctcggtggtgctgatcggcggcgacccc
ggcatcggcaagtcgacgattctgttgcagaccctctgcaatatcgcccagcgcatgccg
gcgctgtatgtcactggcgaagaatcccaacagcaggtcgccatgcgcgctcggcgtctg
ggcctgccgcaggacaagctgcgcgtcatgaccgaaacctgcatcgaaaccatcatcgcc
acggccaaggtcgagaagcccaaggtgatggtgatcgactcgatccagacgatcttcacc
gagcaattgcagtccgcaccgggcggcgtgtcgcaggttcgcgaaagtgctgccttgctg
gtgcgttacgcgaaacagagcggtacggcgatctttctggtcggtcacgtcaccaaggaa
ggcgcgctggccggccctcgcgtgctggaacacatggtcgacactgtgctgtatttcgaa
ggcgagtcggatgggcgtctgcgcttgctgcgggcagtgaaaaaccgtttcggcgcagtc
aacgaactgggcgtgttcggcatgaccgacaagggcttgaaggaagtctccaacccgtcg
gcgattttcctgacccgcgcgcaggaagaagtacccggcagcgtggtcatggccacttgg
gaaggcacgcgtccgatgctggtggaagttcaggcgctggtggatgacagccacatgtcc
aacccgcgccgggtcaccctggggctggatcagaatcgactggcgatgctgctggcggtg
ttgcaccgacacggcggcattccgacccacgatcaggacgtgtttctcaacgtggtcggc
ggcgtgaaagtgctggagactgcatcggatctggcgttgatggccgctgtcatgtctagc
ctgcgcaatcgcccgctgccgcatgacttgctagtgttcggcgaagtcgggctgtctggc
gaagtgcggccggtgccgagtggccaggagcgcctcaaagaagccgccaagcatggcttc
aagcgggccatcgtgcctaaaggcaacgcgccgaaagaagcgcctcccggcttgcagatc
atcgccgtcacgcggctggagcaggcactcgacgccctgttcgaataa
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