Pseudomonas cannabina pv. alisalensis: JGS08_03910
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Entry
JGS08_03910 CDS
T07379
Name
(GenBank) PAS domain-containing protein
KO
K02668
two-component system, NtrC family, sensor histidine kinase PilS [EC:
2.7.13.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_03910
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcab01001
]
JGS08_03910
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcab02022
]
JGS08_03910
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_03910
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JGS08_03910
Protein kinases [BR:
pcab01001
]
Histidine kinases
NtrC family
JGS08_03910
Two-component system [BR:
pcab02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
JGS08_03910
Bacterial motility proteins [BR:
pcab02035
]
Pilus system
Twitching motility proteins
JGS08_03910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
HATPase_c_2
PAS
PAS_GdpP
SHR3_chaperone
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QQN22846
LinkDB
All DBs
Position
complement(862868..864460)
Genome browser
AA seq
530 aa
AA seq
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MTAETPHLASPQAQRILRLYHLYRLTIGVVLVLLISSSLETELLQLANPNLFRSGCWLYL
VFNILVVVLLERPTRQSHLFSLAMVDAIMLSGLFYAAGGPSSGIGNLLIASVAISNVLLR
GRIGLLIAAVSAIGIIYLTFYISFGTPSVSNDYVQAGSLGALCFAAALLVQALTARMQTS
EVLAEQRAADVDSLEELNALILQRMRTGILVLDARRQVLLANQGALALLGHERLVGQVID
AYSPQLVDRLRQWLINPIMQPRSISTSAIGPELQPSFVALNRGDQRQTLIFLEDLSQIAH
QAQQLKLAALGRLTAGIAHEIRNPLGAVSHAAQLLNESETLSAPDRRLGQIIHDQSQRID
RVIENVLQLSRRREAQPDLLDLKVWLDAFVADFRDTALPNQLLHVEIHAGTLTTRMDAEQ
LTQVVTNLVQNGLRYSNQNHSLAQVWLKLHHDRKSDLPILEVLDDGPGVSEQHLSKIFEP
LFTTESKGTGLGLYLSRELCESNQAHLEYAPRPGGGSCLRITFAHPFKTS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctgagacgccccaccttgccagcccacaggcgcaacgaattctgcggctgtat
cacctttatcgcctgaccatcggcgtcgtcctggtcctgttgatctccagtagcctggaa
accgaactgttgcagctggccaacccgaacctgttccgctcgggttgctggctgtacctg
gtgttcaacattctggtcgtggtgttgctcgagcgccctacccgtcagtcacacctgttc
agcctggcgatggtcgacgcgatcatgctgtccggcctgttctatgcggcaggcggcccg
tccagcggcatcggcaacctgctgatcgcctcggtcgccatcagtaacgtactgctacgc
ggccgtatcggcttgttgatcgccgccgtatctgccatcggcatcatttacctgacgttc
tacatcagcttcggcacgccttcagtctccaacgactacgtgcaggcaggttcgctgggg
gcgctgtgcttcgccgctgcgttgctggtgcaggcgttgaccgcgcgcatgcagaccagc
gaagtgcttgccgaacagcgtgcagcggacgtcgacagcctggaagaactcaacgcgctg
attctgcaacgcatgcgcaccggcattctggtactggacgctcgacgtcaggtgctgctg
gccaatcagggcgcgctggctttgctgggccacgaacggctggtcggtcaagtgatagac
gcttactcgccgcagttggttgatcgcctgcgccaatggctgatcaatccgatcatgcag
ccgcgcagcatcagcacgtcggccatcggcccagagttgcaaccgagtttcgtcgcactc
aatcggggcgatcagcgccaaacgctgatttttctcgaagatctgtcgcaaatcgcccat
caggcgcaacagctcaagctcgccgcgctgggccgtctgaccgcaggcatcgcccacgaa
atacgcaacccgctgggtgccgtgagccacgctgcgcagttgctcaacgaatcggaaaca
ctcagcgcgccggatcggcgtctggggcagatcattcacgatcagtcgcagcgcattgac
cgagtgattgaaaacgtcttgcagctctctcggcgacgtgaggcgcaacccgatctgctg
gacctgaaagtctggctggacgcatttgtcgccgactttcgcgataccgccctgcccaac
cagttgctgcacgtggagatccatgccggcacactcaccacgcgcatggacgccgaacag
ttgacacaagtggtgaccaatctggtgcagaacggcctgcgctacagcaaccagaatcac
tccttggcgcaggtctggctgaaactccatcatgaccggaaaagcgacctgcccattctc
gaagtgctggacgacgggccaggcgtcagcgaacagcacctgagcaagattttcgaaccc
ttgttcacgactgaaagcaaaggcaccggcctggggctatacctttcccgtgagttgtgc
gaaagcaatcaggcgcatctggaatatgcaccccggccaggcggcggcagttgtttgcgc
attaccttcgcccacccgttcaaaacgagctga
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