Pseudomonas cannabina pv. alisalensis: JGS08_04220
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Entry
JGS08_04220 CDS
T07379
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcab02044
]
JGS08_04220
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_04220
Secretion system [BR:
pcab02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JGS08_04220
Bacterial motility proteins [BR:
pcab02035
]
Pilus system
Pilus assembly proteins
JGS08_04220
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
T2SSF
Smoothelin
Motif
Other DBs
NCBI-ProteinID:
QQN22896
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Position
complement(939481..940698)
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AA seq
405 aa
AA seq
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MASKAVKVSIYTWEGVDKKGAKTGGELSGHNLALVKAQLRKQGINPTKVREKSVSIFGKG
KKIKPLDIAFFSRQMATMMKAGVPLLQSFDIISEGAENPNMRALVGSLKQEVSAGNSFAT
ALRKKPEYFDDLFCNLVDAGEQAGALESLLDRVASYKEKTEKLKAKIKKAMTYPTAVLIV
AFIVSGILLIKVVPQFQSVFAGFNAELPAFTLMVIALSEVVQQWWLAIVVLFFVTFFMLK
RAYKRSQKFRDRLDRFALKIPIIGPLIFKSCVARYARTLATTFAAGVPLVEALDSVAGAT
GNVVFRNAVNQVKQDVSTGMQLNFSMRSTGVFPSLAIQMTAIGEESGALDAMLDKVATYY
EEEVDNMVDSLTSLMEPMIMAVLGVIVGGLVIAMYLPIFKLGSVV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaggcagtcaaagtcagcatttacacttgggaaggtgtcgacaagaaaggc
gcaaaaaccggcggagaactgagcggccataatctggcacttgtgaaggcccaactgcgt
aagcaaggcatcaatccgaccaaggtacgcgaaaagtcagtttctatttttggcaagggc
aagaagatcaagccactggacattgcgttcttttctcgtcagatggcgacgatgatgaag
gctggcgtgcccttgctacagtcattcgacatcatcagtgagggcgcagagaatccaaat
atgcgtgcgctggtcggctcactgaaacaggaagtttcagccggtaacagcttcgcaacg
gccttacggaagaagcctgaatacttcgatgatttgttttgcaatctggtggatgccggt
gagcaagcaggcgcccttgaaagcctgctcgaccgagtagcaagctataaggaaaagact
gaaaagctcaaagccaaaatcaagaaagccatgacctatccgactgccgtattgattgtg
gcttttattgtctcaggcattttgctgattaaagtagtaccgcagtttcaatcagttttt
gccggatttaacgccgaactacctgcatttactctgatggttattgcgctttcggaggtt
gtccaacagtggtggctggcaattgtcgtactgttttttgtgacttttttcatgctcaag
agagcctacaaacgatctcaaaaatttcgtgaccgacttgatcgttttgcattgaaaatc
cccattatcggaccgcttattttcaaatcctgcgtcgcgcgatacgcacgcactctcgct
accacgtttgcggcgggtgttccactggttgaggcgctggactcggtcgccggagcgact
ggcaatgtggtgttccggaacgcagtcaatcaagtcaaacaggatgtatctacaggcatg
cagctgaatttctcgatgcgctcgacaggcgtttttcctagcctcgctatacagatgacc
gcgattggggaagagtccggcgcacttgacgcgatgcttgacaaggtagcgacgtattac
gaagaagaagtcgacaacatggttgatagcctgaccagcctgatggaaccgatgatcatg
gcggtattgggtgtcatcgtcggtggtctggtcattgcgatgtatctgccaattttcaaa
cttggaagcgtcgtctga
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