Pseudomonas cannabina pv. alisalensis: JGS08_04415
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Entry
JGS08_04415 CDS
T07379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA_2
AAA_16
Mg_chelatase
AAA
HTH_11
HTH_23
HTH_8
AAA_22
HTH_AsnC-type
RWP-RK
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QQN22934
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Position
complement(983717..985150)
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AA seq
477 aa
AA seq
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MPHILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERFSIPSFDLIVSDLRLPGAPG
TELIKLGEGKPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVSRILRDRQTVK
SLQAERSAIGKVNGSEKATSQNASGEIGIIGSCPPMLDLYSKIRKVAPTDSNVLVQGESG
TGKELVARALHNLSRRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAA
DGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKNG
EFREDLFYRLHVIALKLPALRERGSDVLEIAQAFLVRQSAKAGRDDLKFAPDAEQAIRHY
SWPGNVRELENAVERSVILCENPDITADLLGIDIELDGLDDDEYMGMAPLPGSSNTAGSE
PSEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKGVANET
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatattttgatcgtcgaagacgaaacgattatccgctcagccctgcgtcgtctg
ctcgaacgcaatcagtatgaggtcagtgaagcgggctccgttcaggaagctcaggaacgt
ttcagcatcccgtcatttgatttgatcgtcagcgacttgcgcctgcccggcgcacccggc
accgaattgatcaaactgggcgaaggtaaaccggtgctgatcatgaccagttacgccagc
ctgcgctcggccgtcgattcgatgaaaatgggcgcggtggattacatcgccaaaccgttc
gatcacgacgaaatgcttcaggccgtctcgcgcatcctgcgtgatcgccagaccgtgaaa
agcctgcaggccgaacgcagcgccatcggcaaggtgaacggtagcgaaaaagccacctca
cagaacgccagtggcgaaatcggcatcattggctcctgcccgccgatgctcgatctgtac
agcaagatccgcaaagttgcgccgaccgattccaacgtcctggttcagggtgaatcgggt
accggcaaggaactggtcgctcgcgcattgcacaacctgtcacgccgggccaaggcaccg
atgatttcggtcaactgcgcggcgatccctgaatcgctgatcgagtccgagctgttcggc
cacgagaaaggcgcattcactggcgccagcgccggtcgtgccggtctggtcgaagcagcg
gacggcggcacgttgtttctcgacgagatcggcgaattgccattggaagcccaggcgcga
ctgctgcgcgtattgcaggaaggcgagattcgtcgggtcggctcggtgcaatcacaaaag
gtcgacgtgcgtctgattgcggcgacccaccgtgacctcaagaccctggccaagaacggc
gaatttcgtgaagacctgttctaccgtctgcacgtgatcgccctcaaactgcccgcgttg
cgcgagcgcggcagcgacgtactggaaattgcccaagcgtttctggtacgccagagcgcc
aaggccggtcgcgacgacttgaagtttgcacccgatgccgaacaggccatccgtcattac
agctggcccggcaacgtgcgcgagctggaaaacgccgtggagcgctcggtcattctttgc
gaaaacccggacatcaccgccgacctgctgggtatcgacatcgaactggacggtcttgat
gatgacgagtacatgggcatggcgccgctgcccggctcctcgaacaccgccggcagcgaa
ccgagcgaagacctctcgctggaagattactttcagcatttcgttctggagcaccaggac
cacatgaccgaaaccgaactggcgcgcaaactgggcgtcagtcgcaagtgtctttgggag
cggcgccagcgcttgggcattccgcgtcgcaaaggcgtcgccaacgaaacctga
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