KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_04755
Entry
JGS08_04755       CDS       T07379                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcab03016]
    JGS08_04755 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcab02048]
    JGS08_04755 (vapC)
Transfer RNA biogenesis [BR:pcab03016]
 Prokaryotic type
  tRNA degradation factors
   JGS08_04755 (vapC)
Prokaryotic defense system [BR:pcab02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    JGS08_04755 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QQN22992
LinkDB
Position
complement(1057958..1058362)
AA seq 134 aa
MLKYMLDTNICIFTIKNKPLSVRETFNLHHGQLCISAITLMELVYGAEKSLSPERNLAVV
EGFTARLEVLPYDNDAAAHTGMIRAELARAGTPIGPYDQMIAGHARALGLIIVTNNLREF
QRVEGVRVDDWVTR
NT seq 405 nt   +upstreamnt  +downstreamnt
atgctcaaatacatgctcgacaccaacatctgtatttttactatcaagaacaaaccctta
tcagtgcgtgaaaccttcaatctccatcacgggcagctttgcatcagtgcaatcacgttg
atggagcttgtttacggtgcagaaaaatctttgagccctgaaagaaatctcgccgttgta
gaaggttttaccgcacgtcttgaagtacttccctacgataatgatgcggccgcccatacc
ggcatgatcagagctgaactggccagggctggtactccgattggcccctatgaccagatg
attgcaggtcatgcccgcgctctcggattgatcattgtgaccaacaacctgcgcgagttt
cagcgcgttgagggtgtgcgtgtggatgactgggtaactcgctga

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