Pseudomonas cannabina pv. alisalensis: JGS08_04790
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Entry
JGS08_04790 CDS
T07379
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_04790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_04790
Transporters [BR:
pcab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JGS08_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF6902
Motif
Other DBs
NCBI-ProteinID:
QQN22998
LinkDB
All DBs
Position
complement(1063231..1064256)
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AA seq
341 aa
AA seq
DB search
MDFKRKLLIAALPLAFCMSGMAQAEVKIKFAEIHPAGYAPVVAEQNMGKKLEEQSKGEIS
FKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFRDQAHMRTII
DGEIGQEILDKITNSQFNMVALAWMDGGTRNLYTKKPVRQMSDLKGMKIRVQGNPVFIET
INDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTITEHLILPEPIV
MSKTTWNKLSLEQQALVKKLAREAQMEERVLWDKSSAEAETKLKAAGVEFITLTPEQKKA
FYDATQPVRDKFGAPYKDLISRIEAVKTNPALAASNTQAAQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaacgcaagctcctcatcgcagcacttccgctggctttctgcatgtcgggc
atggcccaggcagaggtcaagatcaagtttgccgagattcacccggcaggctacgcgccg
gttgtggctgaacagaacatgggcaagaagctcgaagagcaatccaagggcgagatcagc
ttcaagatgtacgcaggcggcgtgctcggctcagagaaggaagtcgtcgagcaagtgcag
agcggtgccgtgcagatgacccgcgtcagcctcggcatcgtcggcccggtggtgccggac
gtaaacgtcttcaacctgccgttcgtgttccgcgatcaggcgcacatgcgcacgatcatc
gacggtgagatcggtcaggagattctcgacaagatcaccaactcgcaattcaacatggtc
gccctggcctggatggatggcggcacccgtaacctgtacaccaaaaagccggtacggcaa
atgtcggacctcaagggcatgaagatccgtgttcagggcaacccggtgttcatcgaaacc
atcaatgacatgggcggcaacggcatcgccatggccaccggcgagatcttcagcgccctg
cagaccggcgtgatcgacggcgctgaaaacaacccgccgacctacttccagcacaatcac
taccagaacgccaagttcttcacgatcaccgagcacttgatcctgcccgagccgatcgtg
atgtcgaaaaccacgtggaacaagctcagcctcgagcaacaggcgctggtgaaaaagctc
gcgcgtgaagcacagatggaagagcgcgtgctgtgggacaagtcgtcagccgaagccgag
accaaactcaaggctgcgggcgtggagttcatcacgctgacaccggagcagaagaaagcc
ttctacgacgcgacccagccggtacgtgacaaattcggcgcgccatacaaggacctgatc
agccgcatcgaggcagtcaagaccaacccggcgctggccgcgagcaacacccaagcggcc
caataa
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