Pseudomonas cannabina pv. alisalensis: JGS08_04875
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Entry
JGS08_04875 CDS
T07379
Name
(GenBank) IS66 family transposase
KO
K07484
transposase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JGS08_04875
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_IS66
DDE_Tnp_IS66_C
LZ_Tnp_IS66
zf-IS66
bZIP_2
Motif
Other DBs
NCBI-ProteinID:
QQN23014
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Position
complement(1087168..1088679)
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AA seq
503 aa
AA seq
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MNSVPENLPDDLQLLKQMLAKMQSRVGFLEEENALLRQRLFGRKSEQTADPATPQLALFN
EAESIADVADEDAEEEVIAPAKRRGKRKALPADLPRIEVIHEMPEHELTCVCGCRKHAIG
EEVSEQLEIVPMQIRVIKHIRKVYACRDCETAPVTADKPAQVIEKSMASPSVLAMLLTTK
YVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCGEHLQPLLNLMRDRLLESRVIHCDETR
VQVNKEPDREPASQSWMWVQTGGPPNQPVVLFDYSTSRAQEVPTRLLEGYRGYLMTDDYA
GYNALGAQAGVERMGCWAHARRKFVEAQKVQPKGKTGRADVALNLINKLYGIERALKEGS
DEQRYEARQQNSVPALTQLHTWMEKTLPHVTAQNALGKAISYLASNWQKLVRYTEAGFLP
IDNNAAERAIRPFVIGRKNWLFSDTPKGATASAQLYSLVETAKANGQEPYAWLRHALERL
PLATSVEDYEALLPWNCTPLLHS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgtgcccgaaaacctccccgacgatcttcaactactcaagcagatgcttgcg
aagatgcagtcgcgggtcggttttcttgaagaggaaaatgcgctgctgcgtcaacgcttg
ttcggacgcaagtccgagcagacagctgatcctgctacgcctcagttggctcttttcaat
gaagcagaaagcatcgccgacgttgccgacgaagacgcggaagaagaggtcattgcaccc
gccaagcgccgtggcaaacgtaaggcgctgcctgcggatctgccgcgcatcgaagtcatt
cacgaaatgcccgagcacgaactgacttgcgtttgtggctgtcgcaaacacgccattggc
gaagaagtcagcgagcagcttgaaatcgtgccgatgcagatccgggtgatcaaacacatc
cgaaaagtctatgcctgccgcgactgcgaaacagccccggtcactgctgataaacctgcg
caagtgatcgagaagagcatggccagccctagcgttttggcgatgctgcttaccactaaa
tatgtagatggtttaccgcttcaccgctttgaaaaagtgttgggccgccacggcatagat
atcccgcgacaaacgttggcgcgctgggtgattcagtgcggcgagcatctgcaacccttg
ctcaacttgatgcgggatcgactgctggaaagtcgtgtcatccactgcgatgagacgcga
gtgcaggttaataaagagcctgatcgagagcccgccagtcaatcctggatgtgggtacaa
actggaggcccgcctaatcagcctgttgttcttttcgactactcaaccagccgtgcgcag
gaagtaccgacgcgtctgctagaaggctatcgtggctacttgatgacggatgattacgcc
ggttacaacgcgcttggcgcgcaagccggtgtcgagcgaatgggttgctgggcgcatgct
cgtcgcaagttcgtagaagcacaaaaagtgcagcccaagggcaaaaccgggcgtgctgat
gttgctctgaatttgatcaacaagctttacggtatcgagcgggcgttgaaagaaggcagc
gatgagcagcgttatgaagctcgccagcaaaacagcgtaccggcgctgactcagttgcac
acctggatggagaaaacgctgcctcacgtcactgcgcaaaatgcgctgggtaaggcgatc
agttatctagccagcaactggcaaaagctggtgcgctataccgaagctggatttttgccc
atcgacaacaatgcggccgagcgtgcgatcagaccgtttgtgatcggacgcaagaactgg
ctattcagcgatacccccaagggcgccacggccagtgctcaactctacagcttggtcgag
acggctaaagccaacggccaagagccctatgcgtggctgcgccacgcattagaacggctg
ccactggcgacctcggttgaagattacgaagccctgttgccttggaattgcacgcctctt
ttgcattcctag
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