Pseudomonas cannabina pv. alisalensis: JGS08_05385
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Entry
JGS08_05385 CDS
T07379
Name
(GenBank) HD-GYP domain-containing protein
KO
K25135
cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JGS08_05385
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Motif
Pfam:
HD_5
DUF3391
HD
HDOD
DUF2973
Motif
Other DBs
NCBI-ProteinID:
QQN23103
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Position
complement(1194738..1195925)
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AA seq
395 aa
AA seq
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MLKKIPVAQLALGMHIHKFCRSWTNDPFWIGLVEVVLEDVDVLKRIQQSDTREVWIETSK
YRAVTAPAALEPAPASHDVAPANLDKEILRARVICGRAREAVMNMFTEARMGRAMDVDDV
LLLVEEISNSILRHPHALISLSRLKTSDEYTYMHSVAVCALMVALARRMGMPDEQIREAG
VAGLMHDVGKMMIDPEVLNKPGRLTTEEFVVMKAHPELGLKILKENQPVAPAVMDVCLHH
HEKVDGSGYPHGLEGDQISIFARMGAVCDVYDAITSDRPYKKGWGVAHSIREMASWKGHF
DEVVFQSFVKTVGIYPIGSLVRLESGRLGVVIEQSEKSLLKPKVKVFMSAHTGKTFAAQI
IDLEGSVERDAIVKIELPADWGLNDIDTLWAGKAG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaagatccctgtcgcccaactcgccctcggcatgcatattcataaattctgc
cgctcgtggaccaacgacccgttctggattggtctggttgaagtggtgcttgaagacgtt
gacgtactcaaacgcattcagcagtcggatacccgcgaagtctggatcgagaccagcaaa
taccgcgcggtcacagcacctgcagcactcgagcctgcgccggcatcgcatgacgtcgct
ccggcaaatctggacaaggaaatcctccgcgcccgggtcatttgcggccgggccagagaa
gccgtaatgaacatgttcaccgaagcccgcatgggacgggccatggacgtcgacgatgta
ctgctgctggtcgaggaaatctccaactcgattctgcgccacccccatgcgctgatcagc
ctgtcacgcctgaagacttcggacgaatacacctacatgcattcagtggcggtctgtgcg
ctgatggtcgcgctcgcccgacgcatgggcatgccggatgaacagatacgcgaagcgggt
gtggcggggttgatgcacgatgtcggcaagatgatgatcgacccggaagtgctcaacaaa
ccgggccggctgaccactgaagagtttgtggtcatgaaagcccatccggaactgggtctg
aaaatcctcaaggaaaaccagccggtggcgccggcggtcatggacgtttgcctgcatcac
cacgaaaaggtcgatggctcgggctacccgcacggcctggaaggcgatcagatcagcatc
tttgccagaatgggtgcggtgtgcgatgtgtatgacgccattacctccgaccggccctac
aaaaaaggctggggcgtcgcccattcgattcgcgaaatggcctcgtggaaaggccacttc
gacgaggtcgtgtttcaaagcttcgtcaaaaccgtgggcatctaccctattggctcactg
gtacggctggaaagcggacggctgggcgtggtgatcgagcagagtgagaagtcgctgctc
aagccgaaagtgaaagtattcatgtcggcacacaccggcaaaacctttgcggcgcagatt
atcgacctcgaaggctctgtagagcgtgatgccatcgtgaaaatcgaattaccggccgac
tggggtctgaacgatatcgacacgctgtgggcaggcaaagcaggctga
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